RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SIX3	O95343	332 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ASS1	P00966	412 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	LTF	P02788	710 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	RPN1	P04843	607 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ESRRA	P11474	423 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	AGA	P20933	346 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	KEL	P23276	732 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CASP1	P29466	404 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	HOXD13	P35453	343 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	STAT6	P42226	847 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CA7	P43166	264 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	SEPHS1	P49903	392 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	VAV2	P52735	878 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	AP3M2	P53677	418 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	OTUD4	Q01804	1114 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CEBPZ	Q03701	1054 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	LAMB3	Q13751	1172 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	IL11RA	Q14626	422 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	TSR1	Q2NL82	804 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNF805	Q5CZA5	627 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PLEKHA7	Q6IQ23	1121 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	FBXL22	Q6P050	247 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	FAM180A	Q6UWF9	173 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	GFRAL	Q6UXV0	394 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PPP1R3B	Q86XI6	285 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	XXYLT1	Q8NBI6	393 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PLA2G15	Q8NCC3	412 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PLEKHO2	Q8TD55	490 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ADAMTS17	Q8TE56	1095 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	DQX1	Q8TE96	717 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CCDC47	Q96A33	483 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	FUBP1	Q96AE4	644 aa	Known RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	DNAJC19	Q96DA6	116 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	BTN2A3P	Q96KV6	586 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PSMB7	Q99436	277 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	PANK2	Q9BZ23	570 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	TM6SF2	Q9BZW4	377 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNF552	Q9H707	407 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	HECA	Q9UBI9	543 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	FBXO2	Q9UK22	296 aa	Predicted RBP	5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CFAP45	Q9UL16	551 aa		5.37	□□□□□ -1.55
SEC13-219	ENST00000492602	CHD5	Q8TDI0	1954 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602		A0A0U1RQS6	177 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PRSS38	A1L453	326 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	KCNU1	A8MYU2	1149 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PPP1R3G	B7ZBB8	358 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TNFRSF10C	O14798	259 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	KCNAB3	O43448	404 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	CREB3	O43889	395 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	KLHL41	O60662	606 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	IPO13	O94829	963 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TIAF1	O95411	115 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ADCY5	O95622	1261 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	UGT2B4	P06133	528 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	RHOC	P08134	193 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	FGF5	P12034	268 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	DNASE1	P24855	282 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TSFM	P43897	325 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	IRAK1	P51617	712 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	KIAA1024L	P59773	190 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PDE1B	Q01064	536 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	MTM1	Q13496	603 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PEX6	Q13608	980 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ATP1A4	Q13733	1029 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	MYBPC3	Q14896	1274 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	STK38	Q15208	465 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	HIF1A	Q16665	826 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	GOLGA7B	Q2TAP0	167 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	FAM69B	Q5VUD6	431 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ARHGAP17	Q68EM7	881 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	FCRL6	Q6DN72	434 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TMEM207	Q6UWW9	146 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TAC4	Q86UU9	113 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	GALNT16	Q8N428	558 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ZBTB2	Q8N680	514 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PCDH20	Q8N6Y1	951 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	BCORP1	Q8N888	145 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ATP6V0D2	Q8N8Y2	350 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	IQUB	Q8NA54	791 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ACBD4	Q8NC06	268 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	UBA3	Q8TBC4	463 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	DNAJB14	Q8TBM8	379 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	CLEC4C	Q8WTT0	213 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	MR1	Q95460	341 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	INTS4	Q96HW7	963 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	CNDP1	Q96KN2	507 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	KLHL32	Q96NJ5	620 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	AGAP3	Q96P47	875 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ALPK1	Q96QP1	1244 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	PRMT1	Q99873	361 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	WDR77	Q9BQA1	342 aa	Predicted RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNF559	Q9BR84	538 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	LGR4	Q9BXB1	951 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	LIME1	Q9H400	295 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	CUEDC2	Q9H467	287 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	CYP3A43	Q9HB55	503 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	AGPAT3	Q9NRZ7	376 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms