RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TEX33O43247 280 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 PRAMEF11O60813 436 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 THRAP10827 490 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 STAT1P42224 750 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 ATP1A2P50993 1020 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 SQSTM1Q13501 440 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 PARP15Q460N3 678 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 DPPA4Q7L190 304 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 SLFN11Q7Z7L1 901 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 SRLQ86TD4 932 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 CACNA2D3Q8IZS8 1091 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 IL22RA1Q8N6P7 574 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
USF1-206ENST00000491629 COQ10AQ96MF6 247 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 FRMD8Q9BZ67 464 aaPredicted RBP13.24□□□□□ -0.29
USF1-206ENST00000491629 WDR26Q9H7D7 661 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 SUDS3Q9H7L9 328 aaPredicted RBP13.24□□□□□ -0.29
USF1-206ENST00000491629 CARS2Q9HA77 564 aaKnown RBP13.24□□□□□ -0.29
USF1-206ENST00000491629 MOSPD1Q9UJG1 213 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 FZD10Q9ULW2 581 aa13.24□□□□□ -0.29
USF1-206ENST00000491629 LOC101059948A0A1B0GTJ6 334 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 TTC24A2A3L6 582 aaPredicted RBP13.23□□□□□ -0.29
USF1-206ENST00000491629 RHPN2P1A8MT19 583 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 K7EM74 188 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 CCP110O43303 1012 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 CREB3O43889 395 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 RAD1O60671 282 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 ELFN1P0C7U0 828 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
USF1-206ENST00000491629 OAS2P29728 719 aaKnown RBP13.23□□□□□ -0.29
USF1-206ENST00000491629 CCR10P46092 362 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 CSNK1DP48730 415 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 POLD2P49005 469 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 CDR2Q01850 454 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 GRM3Q14832 879 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 PTPRRQ15256 657 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 TIPARPQ7Z3E1 657 aaKnown RBP13.23□□□□□ -0.29
USF1-206ENST00000491629 CBARPQ8N350 705 aaPredicted RBP13.23□□□□□ -0.29
USF1-206ENST00000491629 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 OR4D9Q8NGE8 314 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 SLC45A3Q96JT2 553 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 TUBGCP2Q9BSJ2 902 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 DDA1Q9BW61 102 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 TEX101Q9BY14 249 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 STK33Q9BYT3 514 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 GANQ9H2C0 597 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 SUFUQ9UMX1 484 aa13.23□□□□□ -0.29
USF1-206ENST00000491629 ESPL1Q14674 2120 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 EPHB6O15197 1021 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 GFPT2O94808 682 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 KRT3P12035 628 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 GPD1P21695 349 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 KELP23276 732 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 GPR3P46089 330 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 KLK7P49862 253 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 CTBSQ01459 385 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
USF1-206ENST00000491629 CAMK4Q16566 473 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 ATP1A1-AS1Q5TC04 95 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 ANKS6Q68DC2 871 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 HEATR4Q86WZ0 1026 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 TP53INP2Q8IXH6 220 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 UNC5BQ8IZJ1 945 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 AGBL5Q8NDL9 886 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 MIB2Q96AX9 1013 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 RTP4Q96DX8 246 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 GPATCH2LQ9NWQ4 482 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 TRNAU1APQ9NX07 287 aaKnown RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 SLC39A1Q9NY26 324 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 AKAP7Q9P0M2 348 aaPredicted RBP13.22□□□□□ -0.29
USF1-206ENST00000491629 PDP2Q9P2J9 529 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 B4GALT6Q9UBX8 382 aa13.22□□□□□ -0.29
USF1-206ENST00000491629 BLACEA4D250 179 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 EFCAB7A8K855 629 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
USF1-206ENST00000491629 B4E171 279 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 PRKAR1AP10644 381 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 NR1D1P20393 614 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 SERPINA4P29622 427 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 ADCY8P40145 1251 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 TSPAN7P41732 249 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 GNPDA1P46926 289 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
USF1-206ENST00000491629 JAM2P57087 298 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 RPL7AP62424 266 aaKnown RBP13.21□□□□□ -0.29
USF1-206ENST00000491629 OGDHQ02218 1023 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 CDC20Q12834 499 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms