RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	RAI2	Q9Y5P3	530 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	PCDH15	Q96QU1	1955 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	MEI4	A8MW99	385 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	TTC34	A8MYJ7	566 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	ARHGAP33	O14559	1287 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	SOCS5	O75159	536 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	PROS1	P07225	676 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	ATXN1L	P0C7T5	689 aa	Known RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	HLA-DPA1	P20036	260 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	MGAT1	P26572	445 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	ELK3	P41970	407 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	SESN2	P58004	480 aa	Predicted RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	SIM1	P81133	766 aa	Predicted RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	TRAF2	Q12933	501 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	SLC1A5	Q15758	541 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	KYNU	Q16719	465 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101		Q6ZVU0	165 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	IGDCC3	Q8IVU1	814 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	FBXO36	Q8NEA4	188 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	OR2A12	Q8NGT7	310 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	FOXJ1	Q92949	421 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	VOPP1	Q96AW1	172 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	TOE1	Q96GM8	510 aa	Known RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	C9orf72	Q96LT7	481 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	TUBGCP5	Q96RT8	1024 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	EBNA1BP2	Q99848	306 aa	Known RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	NAT9	Q9BTE0	207 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	SCNM1	Q9BWG6	230 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	GPR174	Q9BXC1	333 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	IL22	Q9GZX6	179 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	ATP13A3	Q9H7F0	1226 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	HECA	Q9UBI9	543 aa	Predicted RBP	18.24	■□□□□ 0.51
SRM-206	ENST00000490101	WASF3	Q9UPY6	502 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	PCDHGC4	Q9Y5F7	938 aa		18.24	■□□□□ 0.51
SRM-206	ENST00000490101	MAGEB16	A2A368	324 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	NPC1	O15118	1278 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	RIPK2	O43353	540 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	HTRA2	O43464	458 aa	Predicted RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	ATP8B1	O43520	1251 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CP	P00450	1065 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	PRL	P01236	227 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	FGF1	P05230	155 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	EPHX1	P07099	455 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	SYP	P08247	313 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	PRKCH	P24723	683 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CHRNA4	P43681	627 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	RECQL	P46063	649 aa	Predicted RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CCNH	P51946	323 aa	Predicted RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	RPL26	P61254	145 aa	Known RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	RAD51	Q06609	339 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	BCL2L1	Q07817	233 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	MTM1	Q13496	603 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	GRM3	Q14832	879 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	FNDC3B	Q53EP0	1204 aa	Known RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	SIRPB2	Q5JXA9	342 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	WDR45B	Q5MNZ6	344 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CERCAM	Q5T4B2	595 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	SERPINA13P	Q6UXR4	307 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	DPY19L3	Q6ZPD9	716 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	KDELC2	Q7Z4H8	507 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	PIP4P1	Q86T03	277 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CCNJL	Q8IV13	435 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	ANKMY2	Q8IV38	441 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	IQCK	Q8N0W5	287 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	MPP5	Q8N3R9	675 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	SIPA1	Q96FS4	1042 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	MIR1-1HG	Q9H1L0	117 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	TMEM245	Q9H330	911 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	VIPAS39	Q9H9C1	493 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	PIH1D1	Q9NWS0	290 aa	Known RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	SUSD2	Q9UGT4	822 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	RPL26L1	Q9UNX3	145 aa	Known RBP	18.23	■□□□□ 0.51
SRM-206	ENST00000490101	CHMP2B	Q9UQN3	213 aa		18.23	■□□□□ 0.51
SRM-206	ENST00000490101	MUC22	E2RYF6	1773 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	WDFY3	Q8IZQ1	3526 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	TRAFD1	O14545	582 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	MAP2K7	O14733	419 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	HYAL3	O43820	417 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	FZD6	O60353	706 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	ABHD2	P08910	425 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	GSTA2	P09210	222 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	ACADM	P11310	421 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	HLA-E	P13747	358 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	GNS	P15586	552 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	TPH1	P17752	444 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	MSLN	Q13421	630 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	ENPP2	Q13822	863 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	CFAP58	Q5T655	872 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	TMPRSS6	Q8IU80	811 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	RYBP	Q8N488	228 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	SLC25A41	Q8N5S1	370 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	OR6K2	Q8NGY2	324 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	PTPRN2	Q92932	1015 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	STAMBPL1	Q96FJ0	436 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	ZNF641	Q96N77	438 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	ADGRE3	Q9BY15	652 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	LRRC4C	Q9HCJ2	640 aa		18.22	■□□□□ 0.51

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