RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C17orf82Q86X59 251 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 HID1Q8IV36 788 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 RAVER1Q8IY67 606 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 LSMEM2Q8N112 164 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ATPAF2Q8N5M1 289 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ARL10Q8N8L6 244 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 GPR156Q8NFN8 814 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 OR56A4Q8NGH8 313 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ARRDC2Q8TBH0 407 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF564Q8TBZ8 553 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 MAPK15Q8TD08 544 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 OR1E3Q8WZA6 343 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 GLMNQ92990 594 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 DTD2Q96FN9 168 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SCARF2Q96GP6 870 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 KCNK17Q96T54 332 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 LGR4Q9BXB1 951 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 PACSIN1Q9BY11 444 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 TSPY26PQ9H489 355 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 PRORYQ9H606 182 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 POLR1BQ9H9Y6 1135 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 FGF22Q9HCT0 170 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ASCL3Q9NQ33 180 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 NPDC1Q9NQX5 325 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 PCDHGA8Q9Y5G5 932 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ENTPD2Q9Y5L3 495 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 AK5Q9Y6K8 562 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 LRP4O75096 1905 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 AHCTF1Q8WYP5 2266 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 UNC13CQ8NB66 2214 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 NPIPB15A6NHN6 443 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 C3orf70A6NLC5 250 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 PDE2AO00408 941 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 MATN3O15232 486 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 USP12O75317 370 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 TNFP01375 233 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 PDHA1P08559 390 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 KRT7P08729 469 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 TMEM253P0C7T8 217 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 PNLIPP16233 465 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 KELP23276 732 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ITPKBP27987 946 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 VIPR1P32241 457 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 PDX1P52945 283 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 MAXP61244 160 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 TLE3Q04726 772 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 KRT81Q14533 505 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ARMC12Q5T9G4 340 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 LRRC38Q5VT99 294 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 HSD11B1LQ7Z5J1 315 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 VSTM4Q8IW00 320 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 OR6C4Q8NGE1 309 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 GPBAR1Q8TDU6 330 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 PDXPQ96GD0 296 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF578Q96N58 590 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC46A1Q96NT5 459 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 CHP1Q99653 195 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 SEMA3CQ99985 751 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 FRMD8Q9BZ67 464 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ABCG4Q9H172 646 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 KLQ9UEF7 1012 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 APPL1Q9UKG1 709 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ANKRD36A6QL64 1941 aa9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 ARHGEF17Q96PE2 2063 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-210ENST00000490099 A0A0J9YYE9 177 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 A8MX80 341 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CDRT15L2A8MXV6 281 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CACNB4O00305 520 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CASC3O15234 703 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 GPR37O15354 613 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 MFSD11O43934 449 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 NOBOXO60393 691 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 SOD1P00441 154 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CPP00450 1065 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TRBC1P01850 177 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 MPOP05164 745 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 PCCBP05166 539 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CEACAM5P06731 702 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TPM3P06753 285 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 MYCLP1P12525 358 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CTSEP14091 401 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CCNB1P14635 433 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 KDELR1P24390 212 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 NFKBIAP25963 317 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 RPL26P61254 145 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 GBE1Q04446 702 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TBX2Q13207 712 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TRIM14Q14142 442 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 ACOX1Q15067 660 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 PTPRRQ15256 657 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 IFI16Q16666 785 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms