RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 C7orf57Q8NEG2 295 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 C7orf26Q96N11 449 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SNRNP25Q9BV90 132 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 RASSF1Q9NS23 344 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 DNAJB4Q9UDY4 337 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PLLPQ9Y342 182 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 A0A0X1KG70 313 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 DDTLA6NHG4 134 aaPredicted RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 STX16-NPEPL1H3BU86 382 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 STX16O14662 325 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ATG13O75143 517 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 UGT2B17O75795 530 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SLC35G4P0C7Q5 338 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 GLRA2P23416 452 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SDC2P34741 201 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CCT3P49368 545 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 STARP49675 285 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PKNOX1P55347 436 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ACAP2Q15057 778 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PRR23BQ6ZRT6 265 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 APTXQ7Z2E3 356 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 UNC5BQ8IZJ1 945 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 OR52K1Q8NGK4 314 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 LENG1Q96BZ8 264 aaPredicted RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 EPB41L1Q9H4G0 881 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CMTM6Q9NX76 183 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 NDUFS2O75306 463 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 RPL26P61254 145 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ZSWIM7Q19AV6 140 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SLC41A1Q8IVJ1 513 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 OR52E6Q96RD3 313 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 COPS8Q99627 209 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 RERGLQ9H628 205 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 VWA7Q9Y334 891 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TRAF6Q9Y4K3 522 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SHPRHQ149N8 1683 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 A0A1W2PQ72 361 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TSC22D2O75157 780 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 IDH2P48735 452 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 LARS2Q15031 903 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 NDUFA9Q16795 377 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TRIM2Q9C040 744 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 F8VP50 259 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 GRM6O15303 877 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SSNA1O43805 119 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 NRP2O60462 931 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 EPORP19235 508 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 HSD17B2P37059 387 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 OMPP47874 163 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SCAF8Q9UPN6 1271 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 MAN2B2Q9Y2E5 1009 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 WBP11Q9Y2W2 641 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 TBC1D3BA6NDS4 549 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 FAM153BP0C7A2 387 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 RHAGQ02094 409 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 FAM153CQ494X1 144 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CHST15Q7LFX5 561 aaPredicted RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PQLC1Q8N2U9 271 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 TRPV1Q8NER1 839 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 MBOAT7Q96N66 472 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PIF1Q9H611 641 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 FNIP2Q9P278 1114 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CHURC1-FNTBB4DL54 471 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 RGS20O76081 388 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PTPN9P43378 593 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 NOMO3P69849 1222 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CAPN13Q6MZZ7 669 aaPredicted RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SLC26A9Q7LBE3 791 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 TTC7BQ86TV6 843 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 BHMTQ93088 406 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ZNF347Q96SE7 839 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 BRD9Q9H8M2 597 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ETAA1Q9NY74 926 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CCDC59Q9P031 241 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SIN3BO75182 1162 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ARFIP1P53367 373 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CASP7P55210 303 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 DPY19L1Q2PZI1 675 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 VPS26BQ4G0F5 336 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 GPALPP1Q8IXQ4 340 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PGAM4Q8N0Y7 254 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PYDC1Q8WXC3 89 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SLC9A7Q96T83 725 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ADAM2Q99965 735 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ASTN1O14525 1302 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 LOC100506127A0A0U1RQW1 187 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CDH3P22223 829 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 NBPF12Q5TAG4 269 aaPredicted RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ZNF697Q5TEC3 545 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 DENND5AQ6IQ26 1287 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CYP2R1Q6VVX0 501 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 TRABD2AQ86V40 505 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SNRNP27Q8WVK2 155 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SLC44A1Q8WWI5 657 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 BAP1Q92560 729 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 NUDT4Q9NZJ9 180 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms