RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MICALCLQ6ZW33 695 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 RALGPS2Q86X27 583 aaPredicted RBP21.67■■□□□ 1.06
SMC4-221ENST00000489573 MCMBPQ9BTE3 642 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 SUDS3Q9H7L9 328 aaPredicted RBP21.67■■□□□ 1.06
SMC4-221ENST00000489573 CNOT10Q9H9A5 744 aaKnown RBP21.67■■□□□ 1.06
SMC4-221ENST00000489573 ZFYVE1Q9HBF4 777 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 IL17CQ9P0M4 197 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 DKK3Q9UBP4 350 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 FBXO5Q9UKT4 447 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 PIAS3Q9Y6X2 628 aa21.67■■□□□ 1.06
SMC4-221ENST00000489573 A0A0U1RQS6 177 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 OR51F1A6NGY5 319 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 NPIPB15A6NHN6 443 aaPredicted RBP21.66■■□□□ 1.06
SMC4-221ENST00000489573 F7P08709 466 aaPredicted RBP21.66■■□□□ 1.06
SMC4-221ENST00000489573 MPP1Q00013 466 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 DNAJC3Q13217 504 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 CTBP1Q13363 440 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 PTCRAQ6ISU1 281 aaPredicted RBP21.66■■□□□ 1.06
SMC4-221ENST00000489573 TXNDC11Q6PKC3 985 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 TIFABQ6ZNK6 161 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 C4orf33Q8N1A6 199 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 SERAC1Q96JX3 654 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 ACOX2Q99424 681 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 C19orf43Q9BQ61 176 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 CACNA2D2Q9NY47 1150 aa21.66■■□□□ 1.06
SMC4-221ENST00000489573 ANTXRLA6NF34 631 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 UPK3BL1B0FP48 263 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 UPK3BL2E5RIL1 263 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 NPC1O15118 1278 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 EPHX1P07099 455 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 ASGR2P07307 311 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 KRT4P19013 534 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 NFKBIAP25963 317 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 ZC3HC1Q86WB0 502 aaKnown RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 ZNF513Q8N8E2 541 aaPredicted RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 TMIEQ8NEW7 156 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 GPR150Q8NGU9 434 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 OR4L1Q8NH43 312 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 ALKBH8Q96BT7 664 aaKnown RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 EID2BQ96D98 161 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 RHOJQ9H4E5 214 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 BPIFA1Q9NP55 256 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 SSU72Q9NP77 194 aaKnown RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 ZDHHC4Q9NPG8 344 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 HEBP1Q9NRV9 189 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 CATSPERZQ9NTU4 200 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 FKBPLQ9UIM3 349 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 STON1Q9Y6Q2 735 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 H7C0S8 307 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 K7EQS6 105 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 CLDN7O95471 211 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 CD151P48509 253 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 ENPP2Q13822 863 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 MRNIPQ6NTE8 343 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 CRTC1Q6UUV9 634 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 GALNT7Q86SF2 657 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 CILP2Q8IUL8 1156 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 EZH1Q92800 747 aaPredicted RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 ATXN7L3BQ96GX2 97 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 VPS39Q96JC1 886 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 KLF6Q99612 283 aaPredicted RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 KCNK9Q9NPC2 374 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 MARCH4Q9P2E8 410 aaPredicted RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 B4GALT6Q9UBX8 382 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 ADAM21Q9UKJ8 722 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 PPM1HQ9ULR3 514 aa21.65■■□□□ 1.06
SMC4-221ENST00000489573 SMG5Q9UPR3 1016 aaKnown RBP21.65■■□□□ 1.06
SMC4-221ENST00000489573 TMEM120BA0PK00 339 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 KPNA3O00505 521 aaPredicted RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 CD3EAPO15446 510 aaKnown RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 RFPL1O75677 317 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 AHSGP02765 367 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 CYP2A6P11509 494 aaPredicted RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 TIMP2P16035 220 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 OGNP20774 298 aaKnown RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 XPAP23025 273 aaPredicted RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 GABRB3P28472 473 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 KIR2DL1P43626 348 aaPredicted RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 ABCG1P45844 678 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 PUS10Q3MIT2 529 aaKnown RBP21.64■■□□□ 1.05
SMC4-221ENST00000489573 LRRC66Q68CR7 880 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 FSTL4Q6MZW2 842 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 DSG4Q86SJ6 1040 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 TSPAN33Q86UF1 283 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 CHPFQ8IZ52 775 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 PIP4K2CQ8TBX8 421 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 SGSM3Q96HU1 749 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 FAM129BQ96TA1 746 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 PRSS16Q9NQE7 514 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 FAM50BQ9Y247 325 aa21.64■■□□□ 1.05
SMC4-221ENST00000489573 C16orf96A6NNT2 1141 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 A8MX80 341 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 GOLGA8RI6L899 631 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 PRPF4O43172 522 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMC4-221ENST00000489573 SPAG7O75391 227 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 PYGBP11216 843 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 ITGB7P26010 798 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 MC4RP32245 332 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 LEPRP48357 1165 aaKnown RBP21.63■■□□□ 1.05
SMC4-221ENST00000489573 SEC13P55735 322 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms