RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 C17orf82Q86X59 251 aaPredicted RBP12.41□□□□□ -0.42
CPSF3-204ENST00000489403 NRROSQ86YC3 692 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 PSTKQ8IV42 348 aaKnown RBP12.41□□□□□ -0.42
CPSF3-204ENST00000489403 KIAA1524Q8TCG1 905 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 GPBAR1Q8TDU6 330 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 FNIP1Q8TF40 1166 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 SGF29Q96ES7 293 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 CMKLR1Q99788 373 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 SEMA6CQ9H3T2 930 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 SUDS3Q9H7L9 328 aaPredicted RBP12.41□□□□□ -0.42
CPSF3-204ENST00000489403 CARS2Q9HA77 564 aaKnown RBP12.41□□□□□ -0.42
CPSF3-204ENST00000489403 SPATS2LQ9NUQ6 558 aaKnown RBP12.41□□□□□ -0.42
CPSF3-204ENST00000489403 MYO6Q9UM54 1294 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 PCDHGC4Q9Y5F7 938 aa12.41□□□□□ -0.42
CPSF3-204ENST00000489403 TENM4Q6N022 2769 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 SLC28A2O43868 658 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 HEXIM1O94992 359 aaKnown RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PEX11BO96011 259 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 CPP00450 1065 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 FUCA1P04066 466 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 CEACAM5P06731 702 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 LHCGRP22888 699 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 VIPR1P32241 457 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 HCAR3P49019 387 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZNF135P52742 658 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 MAPK10P53779 464 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZNF235Q14590 738 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 C16orf72Q14CZ0 275 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PHF19Q5T6S3 580 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 USP53Q70EK8 1073 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZNF438Q7Z4V0 828 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 VASH2Q86V25 355 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PGBD5Q8N414 524 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 LZTR1Q8N653 840 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PDCD6IPQ8WUM4 868 aaKnown RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 EXTL1Q92935 676 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 USP7Q93009 1102 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 DTD2Q96FN9 168 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZNF599Q96NL3 588 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 NUDCD1Q96RS6 583 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 TEX101Q9BY14 249 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 FRMD8Q9BZ67 464 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 HAUS4Q9H6D7 363 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ZWILCHQ9H900 591 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 RDH14Q9HBH5 336 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 PHPT1Q9NRX4 125 aaPredicted RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 ETNK2Q9NVF9 386 aa12.4□□□□□ -0.42
CPSF3-204ENST00000489403 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
CPSF3-204ENST00000489403 A0A1W2PQ67 120 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 B4GAT1O43505 415 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 FTLP02792 175 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 FGF1P05230 155 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 WT1P19544 449 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 IL1R2P27930 398 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 ETV3P41162 512 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 OR1D5P58170 312 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 CDK3Q00526 305 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 ILF3Q12906 894 aaKnown RBP eCLIP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 TRAF2Q12933 501 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 NFATC3Q12968 1075 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 NR1D2Q14995 579 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 PTPRRQ15256 657 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 ASIC2Q16515 512 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 DPYSL2Q16555 572 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 SMTNL2Q2TAL5 461 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 MANEAQ5SRI9 462 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 DENND2CQ68D51 928 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 HSD11B1LQ7Z5J1 315 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 PIM3Q86V86 326 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 DTX1Q86Y01 620 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 CBARPQ8N350 705 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-204ENST00000489403 PATE1Q8WXA2 126 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 NUDT22Q9BRQ3 303 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 NOD2Q9HC29 1040 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 SEPT10Q9P0V9 454 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 TAAR2Q9P1P5 351 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 SUFUQ9UMX1 484 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 SCINQ9Y6U3 715 aa12.39□□□□□ -0.43
CPSF3-204ENST00000489403 SDK2Q58EX2 2172 aa12.38□□□□□ -0.43
CPSF3-204ENST00000489403 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
CPSF3-204ENST00000489403 NPIPB15A6NHN6 443 aaPredicted RBP12.38□□□□□ -0.43
CPSF3-204ENST00000489403 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
CPSF3-204ENST00000489403 H3BRJ5 948 aa12.38□□□□□ -0.43
CPSF3-204ENST00000489403 PSMD11O00231 422 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms