RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 NEMP1O14524 444 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 AREL1O15033 823 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 AP1G1O43747 822 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 SLC4A1P02730 911 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 PSMA3P25788 255 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 STX2P32856 288 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 ACVR1Q04771 509 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 UAP1Q16222 522 aaPredicted RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 CNGA3Q16281 694 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 LONRF1Q17RB8 773 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 TMEM52BQ4KMG9 183 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 AGBL4Q5VU57 503 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 LRRC66Q68CR7 880 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 KIAA0930Q6ICG6 404 aaPredicted RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 ESRP1Q6NXG1 681 aaKnown RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 CYS1Q717R9 158 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 TSPAN33Q86UF1 283 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 PGBD3Q8N328 593 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 TSTD1Q8NFU3 115 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 OR4K2Q8NGD2 314 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 ZNF778Q96MU6 729 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 FCRL3Q96P31 734 aaPredicted RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 TRIM56Q9BRZ2 755 aaKnown RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 SLC6A17Q9H1V8 727 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 POLR3BQ9NW08 1133 aaPredicted RBP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 IL17CQ9P0M4 197 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
C9orf16-203ENST00000489240 KCTD3Q9Y597 815 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 UNC80Q8N2C7 3258 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 PLXNA2O75051 1894 aa18.22■□□□□ 0.51
C9orf16-203ENST00000489240 PSMD11O00231 422 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 TSPAN6O43657 245 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 BUD23O43709 281 aaKnown RBP18.21■□□□□ 0.51
C9orf16-203ENST00000489240 RPP40O75818 363 aaKnown RBP18.21■□□□□ 0.51
C9orf16-203ENST00000489240 ELFN1P0C7U0 828 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 LHCGRP22888 699 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 STC1P52823 247 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 PRAMEP78395 509 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 SEMG2Q02383 582 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 RALGDSQ12967 914 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 PDPK2PQ6A1A2 396 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 ZNF449Q6P9G9 518 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 HDXQ7Z353 690 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 RAVER1Q8IY67 606 aaKnown RBP18.21■□□□□ 0.51
C9orf16-203ENST00000489240 OR13C4Q8NGS5 318 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 GABPB2Q8TAK5 448 aaPredicted RBP18.21■□□□□ 0.51
C9orf16-203ENST00000489240 FAM131CQ96AQ9 280 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 CERS2Q96G23 380 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 DNAJC1Q96KC8 554 aaKnown RBP18.21■□□□□ 0.51
C9orf16-203ENST00000489240 CCDC77Q9BR77 488 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 FUT8Q9BYC5 575 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 EPB41L4BQ9H329 900 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 PLAC1Q9HBJ0 212 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 RAD18Q9NS91 495 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 PKD2L2Q9NZM6 624 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 SLC2A6Q9UGQ3 507 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 FADS3Q9Y5Q0 445 aa18.21■□□□□ 0.51
C9orf16-203ENST00000489240 A0A0U1RQS6 177 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 TCRBV9S1A1TA0A576 114 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 SPINT1O43278 529 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 VAPBO95292 243 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 DCNP07585 359 aaKnown RBP18.2■□□□□ 0.5
C9orf16-203ENST00000489240 PTPN5P54829 565 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 TMPRSS15P98073 1019 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 PTSQ03393 145 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CASP8Q14790 479 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 ZDHHC20Q5W0Z9 365 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CWF19L1Q69YN2 538 aaKnown RBP18.2■□□□□ 0.5
C9orf16-203ENST00000489240 LIPIQ6XZB0 460 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CBARPQ8N350 705 aaPredicted RBP18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CAMKK1Q8N5S9 505 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 OR13J1Q8NGT2 312 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CXorf40AQ8TE69 158 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 FBF1Q8TES7 1133 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 HDAC10Q969S8 669 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 EID2BQ96D98 161 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 CDKN2AIPNLQ96HQ2 116 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 PPANQ9NQ55 473 aaKnown RBP18.2■□□□□ 0.5
C9orf16-203ENST00000489240 ITM2CQ9NQX7 267 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 C20orf96Q9NUD7 363 aaPredicted RBP18.2■□□□□ 0.5
C9orf16-203ENST00000489240 MOCS1Q9NZB8 636 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 SERGEFQ9UGK8 458 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 ITM2BQ9Y287 266 aa18.2■□□□□ 0.5
C9orf16-203ENST00000489240 PLXND1Q9Y4D7 1925 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 RGSL1A5PLK6 1076 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 TMEM221A6NGB7 291 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 H7C0S8 307 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 M0R296 226 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 PLRG1O43660 514 aaKnown RBP18.19■□□□□ 0.5
C9orf16-203ENST00000489240 APBB3O95704 486 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 C1SP09871 688 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 NUDT17P0C025 328 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 AOC1P19801 751 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 CXCL12P48061 93 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 LIG3P49916 1009 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 TAS2R38P59533 333 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 MGAT5Q09328 741 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 MTAPQ13126 283 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 PTPRCAPQ14761 206 aa18.19■□□□□ 0.5
C9orf16-203ENST00000489240 STAT4Q14765 748 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms