RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 MYCLP1P12525 358 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 MX2P20592 715 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 CES1P23141 567 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 KDELR1P24390 212 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ACTN2P35609 894 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 EIF2S3P41091 472 aaKnown RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ETV3P41162 512 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ARHGAP25P42331 645 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 GBE1Q04446 702 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 MESDQ14696 234 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 TCEA2Q15560 299 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ISXQ2M1V0 245 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 RBM44Q6ZP01 1051 aaKnown RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 HSD11B1LQ7Z5J1 315 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 SLC35G2Q8TBE7 412 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 RAPGEF5Q92565 580 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 FGF11Q92914 225 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 HDAC11Q96DB2 347 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 DCBLD2Q96PD2 775 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 CCDC3Q9BQI4 270 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 TEX101Q9BY14 249 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 NHEJ1Q9H9Q4 299 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 RBM22Q9NW64 420 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 DTLQ9NZJ0 730 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 SIRPGQ9P1W8 387 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 GPR34Q9UPC5 381 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ITPR1Q14643 2758 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 PRSS38A1L453 326 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 C3orf70A6NLC5 250 aaPredicted RBP12.55□□□□□ -0.4
SRRM1-216ENST00000489130 NTN3O00634 580 aaPredicted RBP12.55□□□□□ -0.4
SRRM1-216ENST00000489130 MPOP05164 745 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 CCNB1P14635 433 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TEAD1P28347 426 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ABCG1P45844 678 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 LSSP48449 732 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 GABREP78334 506 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 DPTQ07507 201 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ITKQ08881 620 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 SLC10A2Q12908 348 aaPredicted RBP12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ARHGEF7Q14155 803 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 IHHQ14623 411 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TCEAL1Q15170 157 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 PTPRRQ15256 657 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ZFYVE27Q5T4F4 411 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 DENND2CQ68D51 928 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 CRTC1Q6UUV9 634 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TECPR1Q7Z6L1 1165 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TSPAN33Q86UF1 283 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 HEATR4Q86WZ0 1026 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 CNGA4Q8IV77 575 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 NDUFAF2Q8N183 169 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 GPR156Q8NFN8 814 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ZNF578Q96N58 590 aaPredicted RBP12.55□□□□□ -0.4
SRRM1-216ENST00000489130 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TDRD1Q9BXT4 1180 aaKnown RBP12.55□□□□□ -0.4
SRRM1-216ENST00000489130 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 SPTLC3Q9NUV7 552 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 GULP1Q9UBP9 304 aa12.55□□□□□ -0.4
SRRM1-216ENST00000489130 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 A0A0J9YYE9 177 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 CASC3O15234 703 aaKnown RBP12.54□□□□□ -0.4
SRRM1-216ENST00000489130 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
SRRM1-216ENST00000489130 TRBC1P01850 177 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 HLA-DQB2P05538 268 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 KRT10P13645 584 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 ZNF30P17039 623 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 CTPS1P17812 591 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 PDX1P52945 283 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 CDK3Q00526 305 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 DSC2Q02487 901 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 PPIDQ08752 370 aaKnown RBP12.54□□□□□ -0.4
SRRM1-216ENST00000489130 TBX2Q13207 712 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-216ENST00000489130 SPIDRQ14159 915 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 LRRC66Q68CR7 880 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 Q6ZVL8 140 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 TAF8Q7Z7C8 310 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 CCDC74AQ96AQ1 378 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
SRRM1-216ENST00000489130 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-216ENST00000489130 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms