RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ZBTB17Q13105 803 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 CDKN3Q16667 212 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 GUSBP11Q6P575 273 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 MFSD7Q6UXD7 560 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 USP45Q70EL2 814 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 SLC35F3Q8IY50 421 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 CCDC170Q8IYT3 715 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 FSTL5Q8N475 847 aaPredicted RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 IFI44Q8TCB0 444 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 DTD2Q96FN9 168 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 TDRD1Q9BXT4 1180 aaKnown RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 FGF22Q9HCT0 170 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 DDX56Q9NY93 547 aaKnown RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 DKK4Q9UBT3 224 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 CHKBQ9Y259 395 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 PCDHA13Q9Y5I0 950 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 COL27A1Q8IZC6 1860 aaPredicted RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 URB1O60287 2271 aaKnown RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 CACNB4O00305 520 aaPredicted RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 OPA1O60313 960 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 PRLP01236 227 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 GP1BAP07359 652 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 HOXC4P09017 264 aaPredicted RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 NFKBIAP25963 317 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 C6orf132Q5T0Z8 1188 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 Q6ZVL8 140 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 RFX6Q8HWS3 928 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 CNTD1Q8N815 330 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 DCBLD1Q8N8Z6 715 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 OR56A4Q8NGH8 313 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 ATL2Q8NHH9 583 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 OLFM3Q96PB7 478 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 PANX2Q96RD6 677 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 MAK16Q9BXY0 300 aaKnown RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 WDR26Q9H7D7 661 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 MRPL40Q9NQ50 206 aaKnown RBP25■■□□□ 1.59
HMGN1-217ENST00000489072 CLCA2Q9UQC9 943 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 ALG6Q9Y672 507 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 DGKBQ9Y6T7 804 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 ITPR1Q14643 2758 aa25■■□□□ 1.59
HMGN1-217ENST00000489072 A0A0J9YYE9 177 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 CPED1A4D0V7 1026 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 PSMD11O00231 422 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 MT-CO3P00414 261 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 TRBC1P01850 177 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 MMP2P08253 660 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 CTSEP14091 401 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 DYNLT1P63172 113 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 IFI35P80217 286 aaPredicted RBP24.99■■□□□ 1.59
HMGN1-217ENST00000489072 ARHGEF7Q14155 803 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 ELOCQ15369 112 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 CDCP2Q5VXM1 449 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 CRTC1Q6UUV9 634 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 RFLNAQ6ZTI6 216 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 EFL1Q7Z2Z2 1120 aaKnown RBP24.99■■□□□ 1.59
HMGN1-217ENST00000489072 TECPR1Q7Z6L1 1165 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 CACTIN-AS1Q8N1I8 211 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 EVA1BQ9NVM1 165 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 NCKIPSDQ9NZQ3 722 aa24.99■■□□□ 1.59
HMGN1-217ENST00000489072 ARHGEF17Q96PE2 2063 aaPredicted RBP24.98■■□□□ 1.59
HMGN1-217ENST00000489072 EME2A4GXA9 379 aaPredicted RBP24.98■■□□□ 1.59
HMGN1-217ENST00000489072 SOWAHDA6NJG2 315 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 TNFP01375 233 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 ZFXP17010 805 aaPredicted RBP24.98■■□□□ 1.59
HMGN1-217ENST00000489072 FECHP22830 423 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 CYLC1P35663 651 aaPredicted RBP24.98■■□□□ 1.59
HMGN1-217ENST00000489072 CDKN2BP42772 138 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 NR0B2Q15466 257 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 TAZQ16635 292 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 LRRC66Q68CR7 880 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 B4GALNT4Q76KP1 1039 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 RBM15Q96T37 977 aaKnown RBP eCLIP24.98■■□□□ 1.59
HMGN1-217ENST00000489072 CEP41Q9BYV8 373 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 HAUS2Q9NVX0 235 aa24.98■■□□□ 1.59
HMGN1-217ENST00000489072 PSTPIP1O43586 416 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 EPHB1P54762 984 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 SKOR1P84550 965 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 PTSQ03393 145 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 AP1B1Q10567 949 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 PDK1Q15118 436 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 SPA17Q15506 151 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 ODF2Q5BJF6 829 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 PERM1Q5SV97 790 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 HEATR4Q86WZ0 1026 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 TEX101Q9BY14 249 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 PCDH9Q9HC56 1237 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 KCTD5Q9NXV2 234 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 FAM208BQ5VWN6 2430 aa24.97■■□□□ 1.59
HMGN1-217ENST00000489072 A0A0A6YYK5 440 aaPredicted RBP24.96■■□□□ 1.59
HMGN1-217ENST00000489072 RCCD1A6NED2 376 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 CAPN8A6NHC0 703 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 TNFRSF10CO14798 259 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 MYCLP1P12525 358 aaPredicted RBP24.96■■□□□ 1.59
HMGN1-217ENST00000489072 KRT10P13645 584 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 KELP23276 732 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 CD86P42081 329 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 MARCKSL1P49006 195 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 LLGL1Q15334 1064 aa24.96■■□□□ 1.59
HMGN1-217ENST00000489072 LVRNQ6Q4G3 990 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms