RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ERAP2Q6P179 960 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 FBXL19Q6PCT2 694 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 CES3Q6UWW8 571 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 USP30Q70CQ3 517 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 HDXQ7Z353 690 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 TSPAN33Q86UF1 283 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 SPEM1Q8N4L4 309 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLDN11-208ENST00000488989 SIPA1Q96FS4 1042 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
CLDN11-208ENST00000488989 GPR63Q9BZJ6 419 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 ACSS3Q9H6R3 686 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 VPS37BQ9H9H4 285 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 SLC2A6Q9UGQ3 507 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 RABGEF1Q9UJ41 708 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 PLXND1Q9Y4D7 1925 aa16.03■□□□□ 0.16
CLDN11-208ENST00000488989 MAP2K7O14733 419 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 DCXO43602 365 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 GABRG2P18507 467 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 PAMP19021 973 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 NDUFV2P19404 249 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 STX2P32856 288 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 TAS2R38P59533 333 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 PTSQ03393 145 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 SFSWAPQ12872 951 aaKnown RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 LONRF1Q17RB8 773 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 LRRC73Q5JTD7 316 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 LRRC66Q68CR7 880 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 CWF19L1Q69YN2 538 aaKnown RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 MAMSTRQ6ZN01 415 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 KBTBD6Q86V97 674 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 OR4K2Q8NGD2 314 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 OR13C4Q8NGS5 318 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 FBF1Q8TES7 1133 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 ERLEC1Q96DZ1 483 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 CERS2Q96G23 380 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 VIPAS39Q9H9C1 493 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 POLR3BQ9NW08 1133 aaPredicted RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 NFKBIL1Q9UBC1 381 aaPredicted RBP16.02■□□□□ 0.16
CLDN11-208ENST00000488989 FETUBQ9UGM5 382 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 FZD4Q9ULV1 537 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 SIT1Q9Y3P8 196 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 NFS1Q9Y697 457 aa16.02■□□□□ 0.16
CLDN11-208ENST00000488989 DOCK9Q9BZ29 2069 aa16.02■□□□□ 0.15
CLDN11-208ENST00000488989 PLXNB3Q9ULL4 1909 aa16.02■□□□□ 0.15
CLDN11-208ENST00000488989 A0A0U1RQS6 177 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 A0A1W2PP55 124 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 TCRBV21S2A2A0A5A6 115 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 FAM159BA6NKW6 160 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 PLK4O00444 970 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 STX7O15400 261 aaKnown RBP16.01■□□□□ 0.15
CLDN11-208ENST00000488989 TCEA3O75764 348 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 RPP40O75818 363 aaKnown RBP16.01■□□□□ 0.15
CLDN11-208ENST00000488989 IGLV3-19P01714 112 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 C1SP09871 688 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 HADHAP40939 763 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 ARSDP51689 593 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 PTPN5P54829 565 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 FAM193AP78312 1265 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 CREB5Q02930 508 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 MGAT5Q09328 741 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 ARHGEF7Q14155 803 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 STAT4Q14765 748 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 TTC31Q49AM3 519 aaPredicted RBP16.01■□□□□ 0.15
CLDN11-208ENST00000488989 PDPK2PQ6A1A2 396 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 LRIG3Q6UXM1 1119 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 LIPIQ6XZB0 460 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 CAPN12Q6ZSI9 719 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 PBXIP1Q96AQ6 731 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 TBATAQ96M53 351 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 SLC6A17Q9H1V8 727 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 MFSD1Q9H3U5 465 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 ZNF446Q9NWS9 450 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 C2orf42Q9NWW7 574 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 FBXL12Q9NXK8 326 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 DLGAP2Q9P1A6 1054 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 SERGEFQ9UGK8 458 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
CLDN11-208ENST00000488989 CCDC78A2IDD5 438 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 RGSL1A5PLK6 1076 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 ATP8B1O43520 1251 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 TSPAN6O43657 245 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 PLRG1O43660 514 aaKnown RBP16■□□□□ 0.15
CLDN11-208ENST00000488989 BUD23O43709 281 aaKnown RBP16■□□□□ 0.15
CLDN11-208ENST00000488989 SHBGP04278 402 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 SPINT3P49223 89 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 EIF3BP55884 814 aaKnown RBP16■□□□□ 0.15
CLDN11-208ENST00000488989 XIAPP98170 497 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 SEMG2Q02383 582 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 NAB1Q13506 487 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 PTPRCAPQ14761 206 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 ALS2CLQ60I27 953 aa16■□□□□ 0.15
CLDN11-208ENST00000488989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
CLDN11-208ENST00000488989 TECPR1Q7Z6L1 1165 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms