RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DENND1AQ8TEH3 1009 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 GORASP1Q9BQQ3 440 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 SLC25A51Q9H1U9 297 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 SUV39H2Q9H5I1 410 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 FBXL12Q9NXK8 326 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 CYP8B1Q9UNU6 501 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 INVSQ9Y283 1065 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 FANCMQ8IYD8 2048 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 ZNF189O75820 626 aaPredicted RBP19.44■□□□□ 0.7
CCM2-216ENST00000488727 STK10O94804 968 aaKnown RBP19.44■□□□□ 0.7
CCM2-216ENST00000488727 CES1P23141 567 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 ITGB7P26010 798 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 SERPINA4P29622 427 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 SSTR1P30872 391 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 CNTN1Q12860 1018 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 MAP7D1Q3KQU3 841 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 PARS2Q7L3T8 475 aaKnown RBP19.44■□□□□ 0.7
CCM2-216ENST00000488727 TAX1BP1Q86VP1 789 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 LONP2Q86WA8 852 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 HDDC3Q8N4P3 179 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 FAM131CQ96AQ9 280 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 TADA1Q96BN2 335 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 ECHDC3Q96DC8 303 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 ZNF641Q96N77 438 aaPredicted RBP19.44■□□□□ 0.7
CCM2-216ENST00000488727 FAM126AQ9BYI3 521 aaPredicted RBP19.44■□□□□ 0.7
CCM2-216ENST00000488727 GBA3Q9H227 469 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 TEX264Q9Y6I9 313 aa19.44■□□□□ 0.7
CCM2-216ENST00000488727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.43■□□□□ 0.7
CCM2-216ENST00000488727 CCT8L1PA6NM43 557 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 C16orf96A6NNT2 1141 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 OPHN1O60890 802 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 ZNF217O75362 1048 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 GCATO75600 419 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 RNASEH2AO75792 299 aaKnown RBP19.43■□□□□ 0.7
CCM2-216ENST00000488727 ASMTLO95671 621 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 MT-CYBP00156 380 aaPredicted RBP19.43■□□□□ 0.7
CCM2-216ENST00000488727 IGLV3-19P01714 112 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 SERPINF2P08697 491 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 P2RY2P41231 377 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 IL9RQ01113 521 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 PIP5KL1Q5T9C9 394 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 AGBL4Q5VU57 503 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 RGS9BPQ6ZS82 235 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 CAPN12Q6ZSI9 719 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 C3orf62Q6ZUJ4 267 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 USP30Q70CQ3 517 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 FAM124AQ86V42 546 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 PALM2Q8IXS6 379 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 PRSS33Q8NF86 280 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 FBF1Q8TES7 1133 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 PPP1R16AQ96I34 528 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 SMC6Q96SB8 1091 aa19.43■□□□□ 0.7
CCM2-216ENST00000488727 ELAC2Q9BQ52 826 aaKnown RBP19.43■□□□□ 0.7
CCM2-216ENST00000488727 IGHV1OR15-9A0A0B4J2B8 117 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 TSPAN11A1L157 253 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 HTRA2O43464 458 aaPredicted RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 KRT15P19012 456 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 PSMB4P28070 264 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 TCF15Q12870 199 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 SRSF5Q13243 272 aaKnown RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 ERN2Q76MJ5 926 aaKnown RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 ZBTB44Q8NCP5 570 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 MCUQ8NE86 351 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 GANCQ8TET4 914 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 MZB1Q8WU39 189 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 OXNAD1Q96HP4 312 aaPredicted RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 FCRL5Q96RD9 977 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 PAFAH2Q99487 392 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 OMDQ99983 421 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 TDRD1Q9BXT4 1180 aaKnown RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 HDAC8Q9BY41 377 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 ZSCAN32Q9NX65 697 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 UBP1Q9NZI7 540 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 DKK3Q9UBP4 350 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 H0Y858 1186 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 TYROBPO43914 113 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 SOCS5O75159 536 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 ACSL1P33121 698 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 ELK3P41970 407 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 WDR4P57081 412 aaKnown RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 LRRC73Q5JTD7 316 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 ITPRIPL1Q6GPH6 555 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 KBTBD6Q86V97 674 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 GDAP1Q8TB36 358 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 DCAKDQ8WVC6 231 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 CYTH2Q99418 400 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 DYRK4Q9NR20 520 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 RAB6BQ9NRW1 208 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 FGFR1OP2Q9NVK5 253 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 MBD1Q9UIS9 605 aaPredicted RBP19.42■□□□□ 0.7
CCM2-216ENST00000488727 FZD4Q9ULV1 537 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 CHMP2BQ9UQN3 213 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 RAI2Q9Y5P3 530 aa19.42■□□□□ 0.7
CCM2-216ENST00000488727 USP34Q70CQ2 3546 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 VPS13AQ96RL7 3174 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 FZD6O60353 706 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 METTL18O95568 372 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 PRLP01236 227 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 PDHA1P08559 390 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms