RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 DRG2P55039 364 aaKnown RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 ABATP80404 500 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 GOLGA8DPQ0D2H9 430 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 FOXD4Q12950 439 aaPredicted RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 OLIG2Q13516 323 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 NAE1Q13564 534 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 CXorf66Q5JRM2 361 aaPredicted RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 OTUD1Q5VV17 481 aaPredicted RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 CFAP161Q6P656 301 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 KLHL35Q6PF15 583 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 CLEC4GQ6UXB4 293 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 B3GNT6Q6ZMB0 384 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 PATL1Q86TB9 770 aaKnown RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 SFTPA2Q8IWL1 248 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 CCDC105Q8IYK2 499 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 NEXN-AS1Q8NBZ9 246 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 OR14L1PQ8NHC6 308 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 TMEM163Q8TC26 289 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 MIB2Q96AX9 1013 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 FAM149B1Q96BN6 582 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 CMTM3Q96MX0 182 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 MEIS3Q99687 375 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 STRA6Q9BX79 667 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 C1QTNF5Q9BXJ0 243 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 GPR108Q9NPR9 543 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 HAUS2Q9NVX0 235 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 HCFC1R1Q9NWW0 138 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 OR6C3Q9NZP0 311 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 DLGAP2Q9P1A6 1054 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 ABI3Q9P2A4 366 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 RCOR1Q9UKL0 485 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 UTYO14607 1347 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 FRMD3A2A2Y4 597 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ANKRD18BA2A2Z9 1011 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 DYTNA2CJ06 578 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 A6NCN8 305 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 TMEM202A6NGA9 273 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 OR6C75A6NL08 312 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 VWA5AO00534 786 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 SPRY3O43610 288 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 GAS8-AS1O95177 125 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 VNN2O95498 520 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 CYC1P08574 325 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 EIF2S3P41091 472 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 RFX2P48378 723 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ADORA2A-AS1P86434 159 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 CSTF3Q12996 717 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 NEDD9Q14511 834 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 DCAF6Q58WW2 860 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 DNTTIP2Q5QJE6 756 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 GKAP1Q5VSY0 366 aaPredicted RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 CAPRIN2Q6IMN6 1127 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 TYW3Q6IPR3 259 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 NCEH1Q6PIU2 408 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 CCDC129Q6ZRS4 1044 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 CLEC17AQ6ZS10 378 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 SHFQ7M4L6 423 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 PRR26Q8N8Z3 221 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 BEST2Q8NFU1 509 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 NUDCD2Q8WVJ2 157 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ADAMTS14Q8WXS8 1223 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 DNASE2BQ8WZ79 361 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 NEUROG1Q92886 237 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 PPP1R13BQ96KQ4 1090 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 TIGD1Q96MW7 591 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 SLITRK1Q96PX8 696 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 NTPCRQ9BSD7 190 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 KCNN2Q9H2S1 579 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 NDST4Q9H3R1 872 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ESRP2Q9H6T0 727 aaKnown RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 MKKSQ9NPJ1 570 aaPredicted RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 RRP7BPQ9NSQ0 103 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 SELENONQ9NZV5 590 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 TBC1D29Q9UFV1 150 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 ZNF215Q9UL58 517 aaPredicted RBP3.31□□□□□ -1.88
CD46-215ENST00000488596 GPR34Q9UPC5 381 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 LYVE1Q9Y5Y7 322 aa3.31□□□□□ -1.88
CD46-215ENST00000488596 C1orf226A1L170 272 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 MYO1GB0I1T2 1018 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ASAP2O43150 1006 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 HSPA12AO43301 675 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ZIC3O60481 467 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 SOX30O94993 753 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 NDUFB4O95168 129 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 IPO7O95373 1038 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 LDHCP07864 332 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 HOXB5P09067 269 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ZNF182P17025 639 aaPredicted RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 BDNFP23560 247 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 HOXD13P35453 343 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 NUDT6P53370 316 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 GALCP54803 685 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ROR2Q01974 943 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 NIPAL4Q0D2K0 466 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ST3GAL1Q11201 340 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms