RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 PCCBP05166 539 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 KRT10P13645 584 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 WT1P19544 449 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 GPD1P21695 349 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 PRKCIP41743 596 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 NDST2P52849 883 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 TBR1Q16650 682 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 TDRD12Q587J7 1177 aaKnown RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 WDR59Q6PJI9 974 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 RD3Q7Z3Z2 195 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 PLA2G15Q8NCC3 412 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 SLC30A5Q8TAD4 765 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 EXOC2Q96KP1 924 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 AGPAT1Q99943 283 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 GEMIN8Q9NWZ8 242 aaKnown RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 LRIT1Q9P2V4 623 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 BZW2Q9Y6E2 419 aaKnown RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
TTC3-221ENST00000488522 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
TTC3-221ENST00000488522 CCP110O43303 1012 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 PPFIA2O75334 1257 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 CPNE6O95741 557 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 CALB1P05937 261 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 FAM87AP0C7U9 286 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 SKILP12757 684 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 SERPINA4P29622 427 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
TTC3-221ENST00000488522 NSFP46459 744 aaKnown RBP12.3□□□□□ -0.44
TTC3-221ENST00000488522 SQSTM1Q13501 440 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 C16orf72Q14CZ0 275 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 DPPA4Q7L190 304 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 MON1BQ7L1V2 547 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 TAF8Q7Z7C8 310 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 ZSCAN1Q8NBB4 408 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 NETO2Q8NC67 525 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 FAM46DQ8NEK8 389 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 GPBAR1Q8TDU6 330 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 USP7Q93009 1102 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 PCDHB18PQ96TA0 734 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
TTC3-221ENST00000488522 SELENOOQ9BVL4 669 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 SLC12A9Q9BXP2 914 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 TRIM4Q9C037 500 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 TMEM168Q9H0V1 697 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 ATP13A3Q9H7F0 1226 aa12.3□□□□□ -0.44
TTC3-221ENST00000488522 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 PRSS38A1L453 326 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 STMND1H3BQB6 276 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 J3KR12 359 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 B4GAT1O43505 415 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 TNFAIP3P21580 790 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 TEAD1P28347 426 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 RGRP47804 291 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 ARSDP51689 593 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 NSUN2Q08J23 767 aaKnown RBP eCLIP12.29□□□□□ -0.44
TTC3-221ENST00000488522 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
TTC3-221ENST00000488522 TCEA2Q15560 299 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 HGSNATQ68CP4 663 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 ZNF574Q6ZN55 896 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 SRLQ86TD4 932 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 VASH2Q86V25 355 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 ZNF354CQ86Y25 554 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 NRROSQ86YC3 692 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 CAMK1DQ8IU85 385 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 Q8N9G6 341 aaPredicted RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 TC2NQ8N9U0 490 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 CDH19Q9H159 772 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 SLC25A18Q9H1K4 315 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 WDR26Q9H7D7 661 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
TTC3-221ENST00000488522 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 ADAM22Q9P0K1 906 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 TUBD1Q9UJT1 453 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 PCDHB11Q9Y5F2 797 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 RELNP78509 3460 aa12.29□□□□□ -0.44
TTC3-221ENST00000488522 B4DGG1 531 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms