RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SLFN13Q68D06 897 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LMBRD2Q68DH5 695 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 XAF1Q6GPH4 301 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ERAP2Q6P179 960 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 OGFOD3Q6PK18 319 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MFSD7Q6UXD7 560 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SPOCD1Q6ZMY3 1216 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZBTB49Q6ZSB9 765 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC16A12Q6ZSM3 486 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZCCHC23Q6ZST2 131 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GLRX5Q86SX6 157 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 OSTM1Q86WC4 334 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX32Q86XE0 403 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RIOX2Q8IUF8 465 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LURAP1LQ8IV03 231 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAVER1Q8IY67 606 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ELMOD2Q8IZ81 293 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ADGRF2Q8IZF7 708 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CLYBLQ8N0X4 340 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SYNE4Q8N205 404 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ARHGEF39Q8N4T4 335 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZSWIM2Q8NEG5 633 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PHF10Q8WUB8 498 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 OSCP1Q8WVF1 389 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LRTOMTQ8WZ04 291 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX19Q92543 992 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KAT5Q92993 513 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATP6V1E2Q96A05 226 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 VPS33AQ96AX1 596 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 DCPSQ96C86 337 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NSUN4Q96CB9 384 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PGBD4Q96DM1 585 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ERLEC1Q96DZ1 483 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NRBF2Q96F24 287 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 VCPIP1Q96JH7 1222 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 C8orf48Q96LL4 319 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GLT1D1Q96MS3 346 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CSF3RQ99062 836 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLA2Q9H6Q3 261 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AS3MTQ9HBK9 375 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SYTL2Q9HCH5 934 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAB20Q9NX57 234 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PKD2L2Q9NZM6 624 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KLQ9UEF7 1012 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 COQ4Q9Y3A0 265 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHB4Q9Y5E5 795 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHGA8Q9Y5G5 932 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CDY2AQ9Y6F7 541 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CDY1Q9Y6F8 540 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TEX51A0A1B0GUA7 166 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCRBV7S3A2A0A539 114 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SHISA3A0PJX4 238 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM159BA6NKW6 160 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM170BA6NMN3 283 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCP10L2B9ZVM9 353 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SGK1O00141 431 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TAF4O00268 1085 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOP56O00567 594 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AIM2O14862 343 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 BET1O15155 118 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRIM24O15164 1050 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CHADO15335 359 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MTSS1O43312 755 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PLIN3O60664 434 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 UGT2B11O75310 529 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TOM1L1O75674 476 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TOMM70O94826 608 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GABARAPO95166 117 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CBX7O95931 251 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KRT1P04264 644 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TSPY3P0CV98 308 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TSPY8P0CW00 308 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNHG28P0DPA3 235 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KRT10P13645 584 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NCF2P19878 526 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 IL4RP24394 825 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TBXAS1P24557 533 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GSTM2P28161 218 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 EEF1DP29692 281 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RRM2P31350 389 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ARRB2P32121 409 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RPL22P35268 128 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CAPGP40121 348 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CDKN2BP42772 138 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAGEA6P43360 314 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 QARSP47897 775 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CYP2J2P51589 502 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CLCNKBP51801 687 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 VAMP7P51809 220 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF135P52742 658 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AP2S1P53680 142 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ABCE1P61221 599 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 B2MP61769 119 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms