RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NAB1Q13506 487 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 LONRF1Q17RB8 773 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 KLHL38Q2WGJ6 581 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 FAM153CQ494X1 144 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 AARS2Q5JTZ9 985 aaKnown RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 BEND6Q5SZJ8 279 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PIP5KL1Q5T9C9 394 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 AGBL4Q5VU57 503 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 LRRC66Q68CR7 880 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PDPK2PQ6A1A2 396 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 KIAA0930Q6ICG6 404 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 KIAA1161Q6NSJ0 714 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CRTC1Q6UUV9 634 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 KIAA1324Q6UXG2 1013 aaKnown RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CYP2U1Q7Z449 544 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 C11orf74Q86VG3 221 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PGBD3Q8N328 593 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 MPP5Q8N3R9 675 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CXorf40AQ8TE69 158 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 HMGB4Q8WW32 186 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 ARRDC3Q96B67 414 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PLEKHG4BQ96PX9 1271 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CYTH2Q99418 400 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 FUT8Q9BYC5 575 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 BTBD1Q9H0C5 482 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PCED1AQ9H1Q7 454 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CHRAC1Q9NRG0 131 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 TREX1Q9NSU2 369 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 NLE1Q9NVX2 485 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 NFKBIL1Q9UBC1 381 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 FETUBQ9UGM5 382 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CHMP2BQ9UQN3 213 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 FADS3Q9Y5Q0 445 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 A0A1W2PP55 124 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 NPIPB15A6NHN6 443 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 WNT9AO14904 365 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 RIPK2O43353 540 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 PLRG1O43660 514 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 RPP40O75818 363 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ALPIP09923 528 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 CTPS1P17812 591 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 GABRG2P18507 467 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 COL9A1P20849 921 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 DRD3P35462 400 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 STC1P52823 247 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 MTAPQ13126 283 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 OLIG2Q13516 323 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 STAT4Q14765 748 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 CRYMQ14894 314 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 CDKN3Q16667 212 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 KYNUQ16719 465 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 FAM182AQ5T1J6 154 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ALS2CLQ60I27 953 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ANO7Q6IWH7 933 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 MRNIPQ6NTE8 343 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 AFTPHQ6ULP2 937 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 UNC5AQ6ZN44 842 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 KIAA0408Q6ZU52 694 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ZNF765Q7L2R6 523 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 HDXQ7Z353 690 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 SDCCAG8Q86SQ7 713 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 TTC30BQ8N4P2 665 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 AADATQ8N5Z0 425 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ASB12Q8WXK4 309 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 ZNF669Q96BR6 464 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 SPACA7Q96KW9 195 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 C9orf72Q96LT7 481 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 FAM126AQ9BYI3 521 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 CDC42EP4Q9H3Q1 356 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 SEMA4AQ9H3S1 761 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 LRRC4CQ9HCJ2 640 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 PIH1D1Q9NWS0 290 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 MOCS1Q9NZB8 636 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 NINJ2Q9NZG7 142 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 IL17CQ9P0M4 197 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 USP36Q9P275 1121 aaKnown RBP11.04□□□□□ -0.64
HDLBP-242ENST00000488013 SPO11Q9Y5K1 396 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 COL4A3Q01955 1670 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 COL6A3P12111 3177 aa11.04□□□□□ -0.64
HDLBP-242ENST00000488013 F8W8V4 182 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 PCDH8O95206 1070 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CLDN7O95471 211 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 NUDT17P0C025 328 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SPAM1P38567 509 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SPINT3P49223 89 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms