RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 A0A1W2PQ67 120 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PRSS38A1L453 326 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 D6RAR5 112 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PSMD11O00231 422 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TNFRSF10CO14798 259 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NOBOXO60393 691 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HLA-DQB2P05538 268 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CTSEP14091 401 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ACTN2P35609 894 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LSSP48449 732 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RPIAP49247 311 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PCBP4P57723 403 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SKOR1P84550 965 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DSC2Q02487 901 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TRIM14Q14142 442 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ACOX1Q15067 660 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CERCAMQ5T4B2 595 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SPECC1LQ69YQ0 1117 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PNCKQ6P2M8 343 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HEATR4Q86WZ0 1026 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SPACA3Q8IXA5 215 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SDR16C5Q8N3Y7 309 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GPR156Q8NFN8 814 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CCL4L1Q8NHW4 92 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PIH1D2Q8WWB5 315 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CTNNBL1Q8WYA6 563 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FGF11Q92914 225 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GLMNQ92990 594 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HDAC11Q96DB2 347 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SEMA3CQ99985 751 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TDRD1Q9BXT4 1180 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TEX101Q9BY14 249 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FRMD8Q9BZ67 464 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 POLR1EQ9GZS1 481 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TMEM168Q9H0V1 697 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ABCG4Q9H172 646 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PRORYQ9H606 182 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ABHD10Q9NUJ1 306 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CTTNBP2NLQ9P2B4 639 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PHTF1Q9UMS5 762 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GPR34Q9UPC5 381 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PPIL1Q9Y3C6 166 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
RAB11FIP3-210ENST00000487899 A0A1W2PQM1 296 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CAPN8A6NHC0 703 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 C3orf70A6NLC5 250 aaPredicted RBP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CDRT15L2A8MXV6 281 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 B4DGG1 531 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FUCA1P04066 466 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TPM3P06753 285 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 H2AFZP0C0S5 128 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TMEM253P0C7T8 217 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CTPS1P17812 591 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PTMSP20962 102 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 KELP23276 732 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SSR1P43307 286 aaKnown RBP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CDK3Q00526 305 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SLC10A2Q12908 348 aaPredicted RBP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SPIDRQ14159 915 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HADHQ16836 314 aaKnown RBP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ARMC12Q5T9G4 340 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LRRC66Q68CR7 880 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RFLNAQ6ZTI6 216 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 Q6ZVL8 140 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 USP45Q70EL2 814 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 H2AFVQ71UI9 128 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TECPR1Q7Z6L1 1165 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GKN2Q86XP6 184 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LRRC49Q8IUZ0 686 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 VSTM4Q8IW00 320 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BBS5Q8N3I7 341 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PAF1Q8N7H5 531 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PLD5Q8N7P1 536 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TPCN2Q8NHX9 752 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RAPGEF5Q92565 580 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SCRN2Q96FV2 425 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ZNF578Q96N58 590 aaPredicted RBP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CYP4F12Q9HCS2 524 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DTLQ9NZJ0 730 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DOLKQ9UPQ8 538 aa11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.21□□□□□ -0.61
RAB11FIP3-210ENST00000487899 AHCTF1Q8WYP5 2266 aa11.21□□□□□ -0.62
RAB11FIP3-210ENST00000487899 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 A0A0J9YYE9 177 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MTA2O94776 668 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PRLP01236 227 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TNFP01375 233 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TRBC1P01850 177 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CEACAM5P06731 702 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MMP2P08253 660 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 KRT7P08729 469 aa11.2□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CYP2A6P11509 494 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms