RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PON1P27169 355 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 HOXD9P28356 352 aaPredicted RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 PPP3CCP48454 512 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 CLCN3P51790 818 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 AIMP1Q12904 312 aaKnown RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 TNFAIP1Q13829 316 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 NEDD9Q14511 834 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 INPP5JQ15735 1006 aaPredicted RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 SPECC1Q5M775 1068 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 PLEKHA7Q6IQ23 1121 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 HIST3H2AQ7L7L0 130 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 YTHDF3Q7Z739 585 aaKnown RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 PALB2Q86YC2 1186 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 APPL2Q8NEU8 664 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 OR14L1PQ8NHC6 308 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 PRSS3P2Q8NHM4 247 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 TMEM163Q8TC26 289 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 RRNAD1Q96FB5 475 aaKnown RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 WDR77Q9BQA1 342 aaPredicted RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 PRSS22Q9GZN4 317 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 HRH4Q9H3N8 390 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 MAP6D1Q9H9H5 199 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.89□□□□□ -1.47
CUL3-211ENST00000487558 ARHGEF38Q9NXL2 777 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 CWC15Q9P013 229 aaKnown RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 R3HDM2Q9Y2K5 976 aaKnown RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 CMAHPQ9Y471 501 aa5.89□□□□□ -1.47
CUL3-211ENST00000487558 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
CUL3-211ENST00000487558 A0A1W2PRQ8 180 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 TMEM202A6NGA9 273 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 WIPF3A6NGB9 483 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 LRRC72A6NJI9 287 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 KCNU1A8MYU2 1149 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 ZNF814B7Z6K7 855 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 E5RJQ4 531 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 H7C0S8 307 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 ADAM20O43506 726 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 MITFO75030 526 aaPredicted RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 CHRNB2P17787 502 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 PRCPP42785 496 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 STAT2P52630 851 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 Q5PR19 223 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 CFAP77Q6ZQR2 320 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 MB21D2Q8IYB1 491 aaPredicted RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 IL17RCQ8NAC3 791 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 MSI2Q96DH6 328 aaKnown RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 GCNAQ96QF7 691 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 TRMOQ9BU70 441 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 RABEP2Q9H5N1 569 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 SLC28A3Q9HAS3 691 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 FZD3Q9NPG1 666 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 DDX4Q9NQI0 724 aaKnown RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 DECR2Q9NUI1 292 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 TAB2Q9NYJ8 693 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 CISD1Q9NZ45 108 aaKnown RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 GIMAP2Q9UG22 337 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 ZHX1Q9UKY1 873 aaPredicted RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 EXO1Q9UQ84 846 aaKnown RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 PTRH2Q9Y3E5 179 aaKnown RBP5.88□□□□□ -1.47
CUL3-211ENST00000487558 ZNF711Q9Y462 761 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
CUL3-211ENST00000487558 A0A1W2PPC1 479 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 ATG13O75143 517 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 GPTP24298 496 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 ST3GAL1Q11201 340 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 MTX1Q13505 466 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 TRIP6Q15654 476 aaKnown RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 C2orf68Q2NKX9 166 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 CDONQ4KMG0 1287 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 ASPHD1Q5U4P2 390 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 SLC16A12Q6ZSM3 486 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 ANKRD23Q86SG2 305 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 KBTBD6Q86V97 674 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 GLCCI1Q86VQ1 547 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 EPHX4Q8IUS5 362 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 LINC00346Q8IVM7 164 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 HJURPQ8NCD3 748 aaPredicted RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 AGBL3Q8NEM8 1001 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 NSMCE1Q8WV22 266 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 IGSF8Q969P0 613 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 LRRC59Q96AG4 307 aaKnown RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 ZMAT2Q96NC0 199 aaKnown RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 PCGF1Q9BSM1 259 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 MSTO1Q9BUK6 570 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 KIFC3Q9BVG8 833 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 MRPL1Q9BYD6 325 aaKnown RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 KLHL4Q9C0H6 718 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 GPR108Q9NPR9 543 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 NRIP3Q9NQ35 241 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 CCDC177Q9NQR7 707 aaPredicted RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 PSD3Q9NYI0 1048 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 PCDHA12Q9UN75 941 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 PPIEQ9UNP9 301 aaKnown RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 COG5Q9UP83 839 aa5.87□□□□□ -1.47
CUL3-211ENST00000487558 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.87□□□□□ -1.47
CUL3-211ENST00000487558 TSPY2A6NKD2 308 aa5.86□□□□□ -1.47
CUL3-211ENST00000487558 TUBBP07437 444 aa5.86□□□□□ -1.47
CUL3-211ENST00000487558 TSPY3P0CV98 308 aa5.86□□□□□ -1.47
CUL3-211ENST00000487558 TSPY8P0CW00 308 aa5.86□□□□□ -1.47
CUL3-211ENST00000487558 TBXAS1P24557 533 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms