RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CTTNBP2NLQ9P2B4 639 aa12.46□□□□□ -0.41
SREBF1-215ENST00000487401 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
SREBF1-215ENST00000487401 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.46□□□□□ -0.412e-10■■□□□ 13.1
SREBF1-215ENST00000487401 URB1O60287 2271 aaKnown RBP12.46□□□□□ -0.42
SREBF1-215ENST00000487401 ATRXP46100 2492 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 TEX51A0A1B0GUA7 166 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 PRSS38A1L453 326 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 B4DGG1 531 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 PSMD11O00231 422 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CASC3O15234 703 aaKnown RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 GYPCP04921 128 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CD48P09326 243 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 MYCLP1P12525 358 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 GLB1P16278 677 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CTPS1P17812 591 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 PTMSP20962 102 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CES1P23141 567 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 IL4RP24394 825 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CASP14P31944 242 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 INHBCP55103 352 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 ZFYVE27Q5T4F4 411 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 TIGD7Q6NT04 549 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 OGFOD3Q6PK18 319 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 HSD11B1LQ7Z5J1 315 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CCNJLQ8IV13 435 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 TEX26Q8N6G2 289 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 KIAA1524Q8TCG1 905 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 DTD2Q96FN9 168 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 TMEM74Q96NL1 305 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 SEMA3CQ99985 751 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 POLR1EQ9GZS1 481 aaKnown RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 CARS2Q9HA77 564 aaKnown RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 UVRAGQ9P2Y5 699 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 APPL1Q9UKG1 709 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 ACACAQ13085 2346 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 PTPRBP23467 1997 aa12.45□□□□□ -0.42
SREBF1-215ENST00000487401 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
SREBF1-215ENST00000487401 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 TK2O00142 265 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 MATN3O15232 486 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ATXN7O15265 892 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 PROSCO94903 275 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 H2AFZP0C0S5 128 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 PNLIPP16233 465 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 GARSP41250 739 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 GNPDA1P46926 289 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 EPHB1P54762 984 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 GALNT2Q10471 571 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 EIF3IQ13347 325 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 BIRC2Q13490 618 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 DPYSL3Q14195 570 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 PDK2Q15119 407 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 IFI16Q16666 785 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ATP13A4Q4VNC1 1196 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 C14orf28Q4W4Y0 310 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 CERCAMQ5T4B2 595 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 Q6ZVL8 140 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 H2AFVQ71UI9 128 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 RAB11FIP2Q7L804 512 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 PELI3Q8N2H9 469 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 CBARPQ8N350 705 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 CCL4L1Q8NHW4 92 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 FAM71BQ8TC56 605 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 PRR11Q96HE9 360 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 MCCC1Q96RQ3 725 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 TEX101Q9BY14 249 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 GSDMCQ9BYG8 508 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 DEF6Q9H4E7 631 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 RBM22Q9NW64 420 aaKnown RBP eCLIP12.44□□□□□ -0.424e-6■□□□□ 11.3
SREBF1-215ENST00000487401 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 ZNHIT6Q9NWK9 470 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 TTLL3Q9Y4R7 772 aa12.44□□□□□ -0.42
SREBF1-215ENST00000487401 NYNRINQ9P2P1 1898 aaKnown RBP12.44□□□□□ -0.42
SREBF1-215ENST00000487401 A0A1W2PQM1 296 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 PMS2P1A4D2B8 440 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 D6RAR5 112 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 PLD2O14939 933 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 ZW10O43264 779 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 MFSD11O43934 449 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 NOBOXO60393 691 aa12.43□□□□□ -0.42
SREBF1-215ENST00000487401 CEACAM5P06731 702 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms