RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TMPRSS15P98073 1019 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MPP1Q00013 466 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 POU4F1Q01851 419 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DMTNQ08495 405 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CTBP1Q13363 440 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ADAM15Q13444 863 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 PDE1CQ14123 709 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DLG2Q15700 870 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 SWI5Q1ZZU3 235 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MYLK3Q32MK0 819 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 PREPLQ4J6C6 727 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 AARS2Q5JTZ9 985 aaKnown RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 GKAP1Q5VSY0 366 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ATG16L1Q676U5 607 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 SYCE2Q6PIF2 218 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MAMSTRQ6ZN01 415 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 RAPH1Q70E73 1250 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CCDC91Q7Z6B0 441 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ADIPOR2Q86V24 386 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CAMK1DQ8IU85 385 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CILP2Q8IUL8 1156 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MFSD6LQ8IWD5 586 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DENND6AQ8IWF6 608 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CACNA2D3Q8IZS8 1091 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 PHTF2Q8N3S3 785 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CPA6Q8N4T0 437 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ANKS4BQ8N8V4 417 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MDGA1Q8NFP4 955 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 OR4K2Q8NGD2 314 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 OR13C4Q8NGS5 318 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 OR4L1Q8NH43 312 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 RAB3IL1Q8TBN0 382 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF75CPQ92670 426 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 RSPRY1Q96DX4 576 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 CDKN2AIPNLQ96HQ2 116 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ELMO2Q96JJ3 720 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DNAJC1Q96KC8 554 aaKnown RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 NSMCE3Q96MG7 304 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF641Q96N77 438 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 TCF12Q99081 682 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 PITPNM3Q9BZ71 974 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 SUV39H2Q9H5I1 410 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 RABEP2Q9H5N1 569 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ZDHHC6Q9H6R6 413 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 FBXO6Q9NRD1 293 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 INTS10Q9NVR2 710 aaKnown RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DEC1Q9P2X7 70 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 HECAQ9UBI9 543 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 GGT7Q9UJ14 662 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 PHTF1Q9UMS5 762 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ACOT9Q9Y305 439 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF711Q9Y462 761 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 KCTD3Q9Y597 815 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 SPO11Q9Y5K1 396 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 DENND4AQ7Z401 1863 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF106Q9H2Y7 1883 aaKnown RBP7.06□□□□□ -1.28
SF3A3-206ENST00000487062 SCN8AQ9UQD0 1980 aa7.06□□□□□ -1.28
SF3A3-206ENST00000487062 A0A0J9YYE9 177 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CCDC162PA2VCL2 907 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 WDR91A4D1P6 747 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 WASH3PC4AMC7 463 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 H7C0S8 307 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TRAFD1O14545 582 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 LINC01565O15544 149 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 BUD23O43709 281 aaKnown RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 BNIP3LO60238 219 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PLIN3O60664 434 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TULP3O75386 442 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 NDUFS3O75489 264 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF821O75541 412 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 HAUS5O94927 633 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PIGNO95427 931 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TRBC1P01850 177 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 SLC4A1P02730 911 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 C2P06681 752 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 DLDP09622 509 aaKnown RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CISD3P0C7P0 127 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ARSAP15289 507 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CTPS1P17812 591 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 SAT1P21673 171 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 FOXN2P32314 431 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 SLC8A1P32418 973 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 HMGCLP35914 325 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TTPAP49638 278 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ARSDP51689 593 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CCNHP51946 323 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PTPN5P54829 565 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 RAB10P61026 200 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 EIF4HQ15056 248 aaKnown RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 E2F5Q15329 346 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 GEN1Q17RS7 908 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TSNAXIP1Q2TAA8 658 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 DGKKQ5KSL6 1271 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms