RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991		A0A1B0GTQ1	180 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991		A0A1W2PR77	199 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	FAM187A	A6NFU0	413 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3L	B9A6J9	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	RIOK3	O14730	519 aa	Known RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	VILL	O15195	856 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	PCDHGA12	O60330	932 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	MAGEC1	O60732	1142 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	SLU7	O95391	586 aa	Known RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	ZIC2	O95409	532 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	PRNP	P04156	253 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3H	P0C7X1	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	PSMB4	P28070	264 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	CD68	P34810	354 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	RGR	P47804	291 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	SCNN1B	P51168	640 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TERF1	P54274	439 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	SNRPD1	P62314	119 aa	Known RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	DSC2	Q02487	901 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	GPS1	Q13098	491 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	PTK6	Q13882	451 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	INAVA	Q3KP66	663 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	CARD16	Q5EG05	197 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	FAXC	Q5TGI0	409 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3G	Q6DHY5	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3C	Q6IPX1	549 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	GALNT15	Q8N3T1	639 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	TMIE	Q8NEW7	156 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	OR2AP1	Q8NGE2	309 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	OR6K2	Q8NGY2	324 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	GRIN3A	Q8TCU5	1115 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	PPP1R16A	Q96I34	528 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	SEMA3C	Q99985	751 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	MGME1	Q9BQP7	344 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	LRRC1	Q9BTT6	524 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	GBA3	Q9H227	469 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	AASDHPPT	Q9NRN7	309 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	FTSJ1	Q9UET6	329 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	ASIC3	Q9UHC3	531 aa		13.15	□□□□□ -0.3
NR1H3-223	ENST00000486991	URB1	O60287	2271 aa	Known RBP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	COL5A1	P20908	1838 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	SPINT1	O43278	529 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	LEFTY1	O75610	366 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	METTL18	O95568	372 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	GSR	P00390	522 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	ITPKB	P27987	946 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	CCNH	P51946	323 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	NIPAL4	Q0D2K0	466 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	BNIP3	Q12983	259 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	PRPSAP1	Q14558	356 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	PARP6	Q2NL67	630 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	TEX35	Q5T0J7	233 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	CCDC70	Q6NSX1	233 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	NEK5	Q6P3R8	708 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	C4orf22	Q6V702	233 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	SRL	Q86TD4	932 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	TRIM69	Q86WT6	500 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	EID2	Q8N6I1	236 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	CCHCR1	Q8TD31	782 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	NUDCD1	Q96RS6	583 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	ELF4	Q99607	663 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	TRIM31	Q9BZY9	425 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	SLC25A51	Q9H1U9	297 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	ZDHHC6	Q9H6R6	413 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	CAAP1	Q9H8G2	361 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	RAB6B	Q9NRW1	208 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	UBP1	Q9NZI7	540 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	HECA	Q9UBI9	543 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	DMTF1	Q9Y222	760 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	NEU2	Q9Y3R4	380 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	KALRN	O60229	2985 aa		13.14	□□□□□ -0.31
NR1H3-223	ENST00000486991	KPNA3	O00505	521 aa	Predicted RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	YKT6	O15498	198 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	INSIG1	O15503	277 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	LDOC1	O95751	146 aa	Predicted RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	PRB1	P04280	392 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	CR2	P20023	1033 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	GK	P32189	559 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	FDFT1	P37268	417 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	ADCY8	P40145	1251 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	CD86	P42081	329 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	CSNK1D	P48730	415 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	AP1S1	P61966	158 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	BASP1	P80723	227 aa	Known RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	SLC7A5	Q01650	507 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	OVGP1	Q12889	678 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	MYLK3	Q32MK0	819 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	ARSI	Q5FYB1	569 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	PLPP6	Q8IY26	295 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	PDCD7	Q8N8D1	485 aa	Known RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	SPATA22	Q8NHS9	363 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	ARRDC2	Q8TBH0	407 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	IMP4	Q96G21	291 aa	Known RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	CNDP2	Q96KP4	475 aa	Known RBP	13.13	□□□□□ -0.31

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