RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 NEPROQ6NW34 567 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 KYAT3Q6YP21 454 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 KIAA0408Q6ZU52 694 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 BLOC1S5Q8TDH9 187 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 RMDN1Q96DB5 314 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 VPS39Q96JC1 886 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 FAM111AQ96PZ2 611 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 IER2Q9BTL4 223 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 GGA2Q9UJY4 613 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 RAI2Q9Y5P3 530 aa14.64□□□□□ -0.07
POLR2J3-204ENST00000486319 ADH1CP00326 375 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CYP17A1P05093 508 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 GSTA1P08263 222 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CD70P32970 193 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 MAPK8P45983 427 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CSNK1DP48730 415 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 ACVR1Q04771 509 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 PDE1CQ14123 709 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 NAIF1Q69YI7 327 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CDHR3Q6ZTQ4 885 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 MICALCLQ6ZW33 695 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 PIGWQ7Z7B1 504 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 SRLQ86TD4 932 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 ZC3HC1Q86WB0 502 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 TMEM25Q86YD3 366 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CACNA2D3Q8IZS8 1091 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 C2CD4AQ8NCU7 369 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 OR13J1Q8NGT2 312 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 STYXQ8WUJ0 223 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 GRAMD1AQ96CP6 724 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 GPR22Q99680 433 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 BBS2Q9BXC9 721 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 FBRSL1Q9HCM7 1045 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 SPHK2Q9NRA0 654 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 FAM86C1Q9NVL1 165 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CLEC4EQ9ULY5 219 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 MTO1Q9Y2Z2 717 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 FCF1Q9Y324 198 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 COL4A2P08572 1712 aa14.63□□□□□ -0.07
POLR2J3-204ENST00000486319 CACNA1HO95180 2353 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 NEDD8-MDP1E9PL57 170 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 PRLP01236 227 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 AHSGP02765 367 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 DRD1P21728 446 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 SLC1A2P43004 574 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 PRAMEP78395 509 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 CSTF1Q05048 431 aaKnown RBP14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 DMC1Q14565 340 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 PITRM1Q5JRX3 1037 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 LY6G5CQ5SRR4 150 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 ZNF470Q6ECI4 717 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 MAMSTRQ6ZN01 415 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 GALNT7Q86SF2 657 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 TRIM42Q8IWZ5 723 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 MAML2Q8IZL2 1156 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 ZNF75CPQ92670 426 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 ATXN7L3BQ96GX2 97 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 SEC16BQ96JE7 1060 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 LMLNQ96KR4 655 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 NSMCE3Q96MG7 304 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 PITPNM3Q9BZ71 974 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 SNX15Q9NRS6 342 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 MARK1Q9P0L2 795 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 FBXO5Q9UKT4 447 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 PCDHGC4Q9Y5F7 938 aa14.62□□□□□ -0.07
POLR2J3-204ENST00000486319 ANKRD66B4E2M5 251 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 IGSF6O95976 241 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 MT-CO1P00395 513 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 EGFP01133 1207 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SP9P0CG40 484 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ADH5P11766 374 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 HLA-FP30511 346 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 CD151P48509 253 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SERPINB4P48594 390 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SULT2A1Q06520 285 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 CTBP1Q13363 440 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 GAS6Q14393 721 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 GRM3Q14832 879 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 TAF1AQ15573 450 aaPredicted RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 DBN1Q16643 649 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 FOXR1Q6PIV2 292 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 Q6ZS52 159 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 DENND6AQ8IWF6 608 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 CCDC197Q8NCU1 140 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 LPCAT1Q8NF37 534 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 C12orf65Q9H3J6 166 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 MANSC1Q9H8J5 431 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 HACD3Q9P035 362 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 SLC25A13Q9UJS0 675 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 FBXO4Q9UKT5 387 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 INTS6Q9UL03 887 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 WDR91A4D1P6 747 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms