RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 PGBD5Q8N414 524 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.65□□□□□ -0.22
DCLK1-207ENST00000486239 FUBP1Q96AE4 644 aaKnown RBP13.65□□□□□ -0.22
DCLK1-207ENST00000486239 PDXPQ96GD0 296 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 SEMA3CQ99985 751 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 POLR1BQ9H9Y6 1135 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 NT5MQ9NPB1 228 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
DCLK1-207ENST00000486239 THSD1Q9NS62 852 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 PADI4Q9UM07 663 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 RAI2Q9Y5P3 530 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 RP1P56715 2156 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 CACNA1GO43497 2377 aa13.65□□□□□ -0.22
DCLK1-207ENST00000486239 PNLIPP16233 465 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 GJC1P36383 396 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 EIF2S3P41091 472 aaKnown RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 UCNP55089 124 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 ITKQ08881 620 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 TRAF2Q12933 501 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 C1orf61Q13536 156 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 BZW1Q7L1Q6 419 aaKnown RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 RD3Q7Z3Z2 195 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 NLRP8Q86W28 1048 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 TP53INP2Q8IXH6 220 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 ZNF248Q8NDW4 579 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 TSACCQ96A04 125 aaPredicted RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 CCDC97Q96F63 343 aaPredicted RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 TEX101Q9BY14 249 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 CLPBQ9H078 707 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 BRD8Q9H0E9 1235 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 TCEAL2Q9H3H9 227 aaPredicted RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 DDX56Q9NY93 547 aaKnown RBP13.64□□□□□ -0.23
DCLK1-207ENST00000486239 PCDHGA8Q9Y5G5 932 aa13.64□□□□□ -0.23
DCLK1-207ENST00000486239 PRSS38A1L453 326 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 PPP1R12AO14974 1030 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 FZD6O60353 706 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 USP12O75317 370 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 PRKCGP05129 697 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CD48P09326 243 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CCNB1P14635 433 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 GLB1P16278 677 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 KDELR1P24390 212 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 MAXP61244 160 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 GABREP78334 506 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 ILF3Q12906 894 aaKnown RBP eCLIP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 TCEAL1Q15170 157 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CLPPQ16740 277 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 COL28A1Q2UY09 1125 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 SARM1Q6SZW1 724 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 TAF8Q7Z7C8 310 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 HEATR4Q86WZ0 1026 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CCDC13Q8IYE1 715 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 NRSN1Q8IZ57 195 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 SLC35G2Q8TBE7 412 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 RNF157Q96PX1 679 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 LYSMD1Q96S90 227 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CCDC3Q9BQI4 270 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 TDRD1Q9BXT4 1180 aaKnown RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 MAK16Q9BXY0 300 aaKnown RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 ADGRE3Q9BY15 652 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 GSDMCQ9BYG8 508 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 STRADBQ9C0K7 418 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 CDH19Q9H159 772 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 NHEJ1Q9H9Q4 299 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 FGF22Q9HCT0 170 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 RBM22Q9NW64 420 aaKnown RBP eCLIP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 TRNAU1APQ9NX07 287 aaKnown RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 PNMA8BQ9ULN7 279 aaPredicted RBP13.63□□□□□ -0.23
DCLK1-207ENST00000486239 TTLL3Q9Y4R7 772 aa13.63□□□□□ -0.23
DCLK1-207ENST00000486239 COL27A1Q8IZC6 1860 aaPredicted RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 A0A0J9YYE9 177 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 LRRD1A4D1F6 860 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 RGSL1A5PLK6 1076 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 TMEM202A6NGA9 273 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 CAPN8A6NHC0 703 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 NPIPB15A6NHN6 443 aaPredicted RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 AKR1B15C9JRZ8 316 aaPredicted RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 TRBC1P01850 177 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 GM2AP17900 193 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 TGM2P21980 687 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 RBMS1P29558 406 aaKnown RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 CLDN6P56747 220 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 IFI35P80217 286 aaPredicted RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 CDK3Q00526 305 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 PPIDQ08752 370 aaKnown RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 MESDQ14696 234 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 PDK1Q15118 436 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 RAET1GQ6H3X3 334 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 ADAMTSL4Q6UY14 1074 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 RHOT1Q8IXI2 618 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 CBARPQ8N350 705 aaPredicted RBP13.62□□□□□ -0.23
DCLK1-207ENST00000486239 ARL14Q8N4G2 192 aa13.62□□□□□ -0.23
DCLK1-207ENST00000486239 KYQ8NBH2 561 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms