RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 SAP25Q8TEE9 199 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 MAIP1Q8WWC4 291 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 NUS1Q96E22 293 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 GORASP1Q9BQQ3 440 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 C10orf88Q9H8K7 445 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 NFKBIL1Q9UBC1 381 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-208ENST00000484246 RSPH14Q9UHP6 348 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 DMXL1Q9Y485 3027 aa15.9■□□□□ 0.14
UPF3A-208ENST00000484246 SPTBN4Q9H254 2564 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 RGSL1A5PLK6 1076 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 KIF5CO60282 957 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 CBFA2T3O75081 653 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 GCATO75600 419 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 ANXA9O76027 345 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 C1SP09871 688 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 ATXN1LP0C7T5 689 aaKnown RBP15.89■□□□□ 0.13
UPF3A-208ENST00000484246 NME1P15531 152 aaKnown RBP15.89■□□□□ 0.13
UPF3A-208ENST00000484246 HLA-DPA1P20036 260 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 TRIM23P36406 574 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 GRK6P43250 576 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 GEMP55040 296 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 KIAA1024LP59773 190 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 PTK2BQ14289 1009 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 SUZ12Q15022 739 aaKnown RBP15.89■□□□□ 0.13
UPF3A-208ENST00000484246 ACOX1Q15067 660 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 INAVAQ3KP66 663 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 TPRG1LQ5T0D9 272 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 NAXDQ8IW45 347 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 BAHD1Q8TBE0 780 aaPredicted RBP15.89■□□□□ 0.13
UPF3A-208ENST00000484246 MRGPRX2Q96LB1 330 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 TTC7AQ9ULT0 858 aaPredicted RBP15.89■□□□□ 0.13
UPF3A-208ENST00000484246 RALGAPA1Q6GYQ0 2036 aa15.89■□□□□ 0.13
UPF3A-208ENST00000484246 PMPCBO75439 489 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 CSF2P04141 144 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PYGLP06737 847 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 CEACAM1P13688 526 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 TSHRP16473 764 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 STIP1P31948 543 aaKnown RBP15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PTSQ03393 145 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-208ENST00000484246 GALNT3Q14435 633 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 NFATC4Q14934 902 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PTPRRQ15256 657 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PCSK7Q16549 785 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 CCNG2Q16589 344 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 FAM182AQ5T1J6 154 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 Q6ZVL8 140 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 ERMP1Q7Z2K6 904 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 GLRX5Q86SX6 157 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 ATL2Q8NHH9 583 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 CCDC110Q8TBZ0 833 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 SMIM14Q96QK8 99 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 APOOQ9BUR5 198 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 TRABDQ9H4I3 376 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 SLC32A1Q9H598 525 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 KCND1Q9NSA2 647 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PCOLCE2Q9UKZ9 415 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PYCARDQ9ULZ3 195 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 AAR2Q9Y312 384 aaKnown RBP15.88■□□□□ 0.13
UPF3A-208ENST00000484246 PI4KAP42356 2102 aa15.88■□□□□ 0.13
UPF3A-208ENST00000484246 SHROOM3Q8TF72 1996 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 C1orf232A0A0U1RR37 186 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 DCDC2BA2VCK2 349 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 A8MX80 341 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 CES2O00748 559 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 PCCBP05166 539 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 FGF1P05230 155 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 ITGAVP06756 1048 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 PSMB4P28070 264 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 ADRA1AP35348 466 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 ETV3P41162 512 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 THOP1P52888 689 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 DCDC1P59894 354 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 EIF2B5Q13144 721 aaKnown RBP15.87■□□□□ 0.13
UPF3A-208ENST00000484246 INPP5AQ14642 412 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 SLC1A5Q15758 541 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 P3H1Q32P28 736 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 CCDC70Q6NSX1 233 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 PNCKQ6P2M8 343 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 DGLUCYQ7Z3D6 616 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 FAM71DQ8N9W8 422 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 PLA2G15Q8NCC3 412 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 PBKQ96KB5 322 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 TMEM121Q9BTD3 319 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 CDH19Q9H159 772 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 WDR26Q9H7D7 661 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 UBP1Q9NZI7 540 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 HACD3Q9P035 362 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 ZNF711Q9Y462 761 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 TRPM6Q9BX84 2022 aa15.87■□□□□ 0.13
UPF3A-208ENST00000484246 USP27XA6NNY8 438 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 TNFRSF10CO14798 259 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 SH3BP5O60239 455 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 PIAS2O75928 621 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms