RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 TEX101Q9BY14 249 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 GANQ9H2C0 597 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 SUDS3Q9H7L9 328 aaPredicted RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 CARS2Q9HA77 564 aaKnown RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 MOSPD1Q9UJG1 213 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 TUBD1Q9UJT1 453 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 FZD10Q9ULW2 581 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 EPHB6O15197 1021 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 CCP110O43303 1012 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 GFPT2O94808 682 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 EML2O95834 649 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 NTRK1P04629 796 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 KRT3P12035 628 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 CCR10P46092 362 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 CSNK1DP48730 415 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 PAPOLAP51003 745 aaKnown RBP12.89□□□□□ -0.35
UBR4-213ENST00000483922 CTBSQ01459 385 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 CDR2Q01850 454 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 OGDHQ02218 1023 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 DPPA4Q7L190 304 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 ARHGAP12Q8IWW6 846 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 TP53INP2Q8IXH6 220 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 OR4D9Q8NGE8 314 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 SLC45A3Q96JT2 553 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 PDP2Q9P2J9 529 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 SUFUQ9UMX1 484 aa12.89□□□□□ -0.35
UBR4-213ENST00000483922 BLACEA4D250 179 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 RHPN2P1A8MT19 583 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 MYCLP1P12525 358 aaPredicted RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 NR1D1P20393 614 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 GPD1P21695 349 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 ADCY8P40145 1251 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 GNPDA1P46926 289 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 ATP1A2P50993 1020 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 RPL7AP62424 266 aaKnown RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 GRM3Q14832 879 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 CA9Q16790 459 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 SCYL2Q6P3W7 929 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 SLC30A9Q6PML9 568 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 MIB2Q96AX9 1013 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 CTRCQ99895 268 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 WDR26Q9H7D7 661 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 APMAPQ9HDC9 416 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 GPATCH2LQ9NWQ4 482 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 B4GALT6Q9UBX8 382 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 PCYT1BQ9Y5K3 369 aaPredicted RBP12.88□□□□□ -0.35
UBR4-213ENST00000483922 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
UBR4-213ENST00000483922 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 EFCAB7A8K855 629 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 MTSS1O43312 755 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 ELFN1P0C7U0 828 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 PRKAR1AP10644 381 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 KELP23276 732 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 F8A1P23610 371 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 GPR3P46089 330 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 JAM2P57087 298 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBR4-213ENST00000483922 TRA2AQ13595 282 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBR4-213ENST00000483922 NCAPHQ15003 741 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 ACOX1Q15067 660 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 CNGA3Q16281 694 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 CLPPQ16740 277 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 C4orf17Q53FE4 359 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 ARHGAP22Q7Z5H3 698 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 HSD11B1LQ7Z5J1 315 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 ZNF761Q86XN6 746 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 ZNF677Q86XU0 584 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 C9orf43Q8TAL5 461 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 SCARF2Q96GP6 870 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 SMIM14Q96QK8 99 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 AKAP7Q9P0M2 348 aaPredicted RBP12.87□□□□□ -0.35
UBR4-213ENST00000483922 SLC17A4Q9Y2C5 497 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms