RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CATSPERBQ9H7T0 1116 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CARS2Q9HA77 564 aaKnown RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PDFQ9HBH1 243 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 TAAR2Q9P1P5 351 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PCDHGA3Q9Y5H0 932 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 B3GALT1Q9Y5Z6 326 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-206ENST00000483030 BOD1L1Q8NFC6 3051 aa7.4□□□□□ -1.23
CSDE1-206ENST00000483030 SIGLEC16A6NMB1 481 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PDE2AO00408 941 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PPM1DO15297 605 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 NKX2-8O15522 239 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 ZW10O43264 779 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CCP110O43303 1012 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PRAMEF11O60813 436 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PALMO75781 387 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CEACAM5P06731 702 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 UNGP13051 313 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 GP1BBP13224 206 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CR2P20023 1033 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 AK4P27144 223 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 SERPINA4P29622 427 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CSTF2P33240 577 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CASRP41180 1078 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 GPR3P46089 330 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 GNPDA1P46926 289 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CSNK1DP48730 415 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PAPOLAP51003 745 aaKnown RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 LIMK2P53671 638 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 POLR2LP62875 67 aaKnown RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 BCL2L1Q07817 233 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 ILF3Q12906 894 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PTP4A2Q12974 167 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 CLPPQ16740 277 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 TSR1Q2NL82 804 aaKnown RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 SLC30A9Q6PML9 568 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 AGBL5Q8NDL9 886 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PTCD2Q8WV60 388 aaKnown RBP7.39□□□□□ -1.23
CSDE1-206ENST00000483030 PATE1Q8WXA2 126 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 ECHDC3Q96DC8 303 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 GSDMCQ9BYG8 508 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 SLC39A8Q9C0K1 460 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 LRRC19Q9H756 370 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 OCIAD1Q9NX40 245 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 SLC39A1Q9NY26 324 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 ADAM22Q9P0K1 906 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 TUBD1Q9UJT1 453 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 FZD10Q9ULW2 581 aa7.39□□□□□ -1.23
CSDE1-206ENST00000483030 COL12A1Q99715 3063 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TRBV23OR9-2A0A075B6M9 112 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 IGHV1OR21-1A0A087WYE8 117 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TTC24A2A3L6 582 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ARHGAP42A6NI28 874 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ZNF891A8MT65 544 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 FGF10O15520 208 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 RAD1O60671 282 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 PRKAR1AP10644 381 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 MYCLP1P12525 358 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 SOX5P35711 763 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ADCY8P40145 1251 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NSFP46459 744 aaKnown RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 POLD2P49005 469 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 PPM1FP49593 454 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 KLK7P49862 253 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 SCNN1BP51168 640 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ZNF143P52747 638 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NDST2P52849 883 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 EMP3P54852 163 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TPI1P60174 286 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 POLR2FP61218 127 aaKnown RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 RPL7AP62424 266 aaKnown RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 CTBSQ01459 385 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NSUN2Q08J23 767 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 SQSTM1Q13501 440 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TRA2AQ13595 282 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NR1D2Q14995 579 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NCAPHQ15003 741 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 CLEC16AQ2KHT3 1053 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 DCAF12Q5T6F0 453 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 DENND2CQ68D51 928 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ANKS6Q68DC2 871 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TRIM72Q6ZMU5 477 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 DPPA4Q7L190 304 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 HEATR4Q86WZ0 1026 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 FAM129CQ86XR2 697 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NRSN1Q8IZ57 195 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NAGSQ8N159 534 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 C3orf20Q8ND61 904 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 CCDC112Q8NEF3 446 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 OR4D9Q8NGE8 314 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 COQ10AQ96MF6 247 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NSMCE3Q96MG7 304 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 CATSPER2Q96P56 530 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 DDA1Q9BW61 102 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 CINPQ9BW66 212 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TEX101Q9BY14 249 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 FRMD8Q9BZ67 464 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ASPSCR1Q9BZE9 553 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms