RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TSPAN33Q86UF1 283 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 PARGQ86W56 976 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 ATL2Q8NHH9 583 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 CCHCR1Q8TD31 782 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 LRRC45Q96CN5 670 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 MAGEE1Q9HCI5 957 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 UBP1Q9NZI7 540 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 TRPM6Q9BX84 2022 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 C1orf232A0A0U1RR37 186 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 LOC285095A0A1B0GVY8 99 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 RGSL1A5PLK6 1076 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 LIASO43766 372 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 CEP104O60308 925 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 GCATO75600 419 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 PCCBP05166 539 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 ITGAVP06756 1048 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 HOXC4P09017 264 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-214ENST00000482733 HLA-DPA1P20036 260 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 HTR1BP28222 390 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 EPHA8P29322 1005 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-214ENST00000482733 ETV3P41162 512 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 STC1P52823 247 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 PTSQ03393 145 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 FZD2Q14332 565 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 INPP5AQ14642 412 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 PRAMEF14Q5SWL7 426 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 MACC1Q6ZN28 852 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 ZNF765Q7L2R6 523 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 KDELC2Q7Z4H8 507 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 TECPR1Q7Z6L1 1165 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 NLRP8Q86W28 1048 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 NAXDQ8IW45 347 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 NRSN1Q8IZ57 195 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 FAM71DQ8N9W8 422 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 CCDC110Q8TBZ0 833 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 SAP25Q8TEE9 199 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-214ENST00000482733 PBKQ96KB5 322 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 APOOQ9BUR5 198 aa16.59■□□□□ 0.25
HMGN1-214ENST00000482733 GOLGA6CA6NDK9 693 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 H3BM21 787 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 CACNB4O00305 520 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PDE2AO00408 941 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-214ENST00000482733 ENC1O14682 589 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 CLDN7O95471 211 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 FGGP02679 453 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PYGLP06737 847 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 GOLGA6DP0CG33 693 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 CEACAM1P13688 526 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 TSHRP16473 764 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 TEAD1P28347 426 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 TRIM23P36406 574 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 GRK6P43250 576 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 HNRNPKP61978 463 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGN1-214ENST00000482733 DPTQ07507 201 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 NFATC4Q14934 902 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PTPRRQ15256 657 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 SHBQ15464 509 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 OASLQ15646 514 aaKnown RBP16.58■□□□□ 0.24
HMGN1-214ENST00000482733 CCNG2Q16589 344 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 CDKN3Q16667 212 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PARP6Q2NL67 630 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PNCKQ6P2M8 343 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 ARHGEF18Q6ZSZ5 1173 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 Q6ZVL8 140 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 SLC35F6Q8N357 371 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 IPMKQ8NFU5 416 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 SETD7Q8WTS6 366 aaKnown RBP16.58■□□□□ 0.24
HMGN1-214ENST00000482733 ATG4AQ8WYN0 398 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 RTP4Q96DX8 246 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 MRGPRX2Q96LB1 330 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 SMIM14Q96QK8 99 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 TMEM121Q9BTD3 319 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 FSD1LQ9BXM9 530 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 TRABDQ9H4I3 376 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 ZFYVE1Q9HBF4 777 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 RAD18Q9NS91 495 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 HOMER3Q9NSC5 361 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 GOLGA6AQ9NYA3 693 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
HMGN1-214ENST00000482733 SH3BP5O60239 455 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 KCNK5O95279 499 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 CSF2P04141 144 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 C1SP09871 688 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 NME1P15531 152 aaKnown RBP16.57■□□□□ 0.24
HMGN1-214ENST00000482733 KELP23276 732 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 PSMB4P28070 264 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 NOVA1P51513 510 aaKnown RBP16.57■□□□□ 0.24
HMGN1-214ENST00000482733 KIAA1024LP59773 190 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 IL9RQ01113 521 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 LONRF2Q1L5Z9 754 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 P3H1Q32P28 736 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 DRICH1Q6PGQ1 229 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-214ENST00000482733 PLA2G15Q8NCC3 412 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 DEFB124Q8NES8 71 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 BTN2A2Q8WVV5 523 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 C1orf54Q8WWF1 131 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 AP2M1Q96CW1 435 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 NAP1L3Q99457 506 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms