RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-211	ENST00000481154	QSOX2	Q6ZRP7	698 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	MTSS1L	Q765P7	747 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	GSTA5	Q7RTV2	222 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	TMEM116	Q8NCL8	245 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	AGBL3	Q8NEM8	1001 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	TXNDC15	Q96J42	360 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	ABI3	Q9P2A4	366 aa		4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	FBXO9	Q9UK97	447 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154	AGO1	Q9UL18	857 aa	Known RBP	4.97	□□□□□ -1.61
PTPN12-211	ENST00000481154		A0A1W2PQF6	199 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154		A0A1W2PRG0	241 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	TMEM202	A6NGA9	273 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	HSPA12A	O43301	675 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	KRT10	P13645	584 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	NFKBIA	P25963	317 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	C21orf33	P30042	268 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	COMP	P49747	757 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	SORD	Q00796	357 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	CEBPZ	Q03701	1054 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	GOLGA8DP	Q0D2H9	430 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	OLIG2	Q13516	323 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	DRAP1	Q14919	205 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	C2orf68	Q2NKX9	166 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	HIST2H2BC	Q6DN03	193 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	HIST2H2BD	Q6DRA6	164 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	ANKRD54	Q6NXT1	300 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	CYP20A1	Q6UW02	462 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	NGEF	Q8N5V2	710 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	FRMD1	Q8N878	549 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	FAM216A	Q8WUB2	273 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	MMAB	Q96EY8	250 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	LRFN5	Q96NI6	719 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	FAM110A	Q9BQ89	295 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	SLC25A33	Q9BSK2	321 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	VPS33B	Q9H267	617 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	MUC13	Q9H3R2	512 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	ESRP2	Q9H6T0	727 aa	Known RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	PLSCR4	Q9NRQ2	329 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	SLCO3A1	Q9UIG8	710 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	CEPT1	Q9Y6K0	416 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	STON1	Q9Y6Q2	735 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	RUSC2	Q8N2Y8	1516 aa		4.96	□□□□□ -1.62
PTPN12-211	ENST00000481154	FAM237B	A0A1B0GVD1	139 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	RNASEH2A	O75792	299 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	CH25H	O95992	272 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	LAMP2	P13473	410 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARL3	P36405	182 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	ART1	P52961	327 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	RPL36A	P83881	106 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	HYAL1	Q12794	435 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	CSTF3	Q12996	717 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	NAE1	Q13564	534 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	MED22	Q15528	200 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	EFHC1	Q5JVL4	640 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	C6orf141	Q5SZD1	244 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	PLEKHA7	Q6IQ23	1121 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	C4orf50	Q6ZRC1	276 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	HAPLN4	Q86UW8	402 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	FJX1	Q86VR8	437 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	WDR63	Q8IWG1	891 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	CLIP4	Q8N3C7	705 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	SLC41A2	Q96JW4	573 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	MMTAG2	Q9BU76	263 aa	Known RBP	4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	ITPA	Q9BY32	194 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	POLR1B	Q9H9Y6	1135 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	EHD2	Q9NZN4	543 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	DLGAP2	Q9P1A6	1054 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	RCOR1	Q9UKL0	485 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	CDC14A	Q9UNH5	594 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	ERVK-11	Q9UQG0	969 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	ADAM18	Q9Y3Q7	739 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	WDR81	Q562E7	1941 aa		4.95	□□□□□ -1.62
PTPN12-211	ENST00000481154	LIPT2	A6NK58	231 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZIC3	O60481	467 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	KCNJ13	O60928	360 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	SERPINI2	O75830	405 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZBTB11	O95625	1053 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	PPP1R3D	O95685	299 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF2S1	P05198	315 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	CYC1	P08574	325 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	IL7R	P16871	459 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	HNRNPH1	P31943	449 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	F2RL1	P55085	397 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF4A2	Q14240	407 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	EFNB3	Q15768	340 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	HLF	Q16534	295 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	USP41	Q3LFD5	358 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZNF628	Q5EBL2	1059 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	HYI	Q5T013	277 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	TTI2	Q6NXR4	508 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	NCEH1	Q6PIU2	408 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	B3GNT6	Q6ZMB0	384 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	NEK10	Q6ZWH5	1172 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZC3HC1	Q86WB0	502 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	PDILT	Q8N807	584 aa		4.94	□□□□□ -1.62

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