RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SEPT10Q9P0V9 454 aa15.35■□□□□ 0.05
CDK9-203ENST00000480353 PNMA8BQ9ULN7 279 aaPredicted RBP15.35■□□□□ 0.05
CDK9-203ENST00000480353 LHX6Q9UPM6 363 aa15.35■□□□□ 0.05
CDK9-203ENST00000480353 NPIPB15A6NHN6 443 aaPredicted RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 TNFRSF10CO14798 259 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 RRP8O43159 456 aaKnown RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 CSO75390 466 aaKnown RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 MTA2O94776 668 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 JCHAINP01591 159 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 HLA-DQB2P05538 268 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 CELA2BP08218 269 aaPredicted RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 HOXC4P09017 264 aaPredicted RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 MYCLP1P12525 358 aaPredicted RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 ACTN2P35609 894 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 ETV3P41162 512 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 GPR1P46091 355 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 DYNLT1P63172 113 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 BIRC2Q13490 618 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 SPIDRQ14159 915 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 PDK1Q15118 436 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 HSD11B1LQ7Z5J1 315 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 HEATR4Q86WZ0 1026 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 SLC35F3Q8IY50 421 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 PQLC3Q8N755 202 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 LPCAT1Q8NF37 534 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 OR6C4Q8NGE1 309 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 WDR48Q8TAF3 677 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 LRRN4Q8WUT4 740 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 HNRNPLLQ8WVV9 542 aaKnown RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 SPOCK2Q92563 424 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 MAML1Q92585 1016 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 FATE1Q969F0 183 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
CDK9-203ENST00000480353 DTD2Q96FN9 168 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 CCDC3Q9BQI4 270 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 DTLQ9NZJ0 730 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 CHKBQ9Y259 395 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 DGKBQ9Y6T7 804 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 SPEGQ15772 3267 aa15.34■□□□□ 0.05
CDK9-203ENST00000480353 LY6G6EA0A0G2JKS1 128 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 PRSS38A1L453 326 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 TMEM202A6NGA9 273 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 USP12O75317 370 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 CAPNS1P04632 268 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 PDHA1P08559 390 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 ZNF30P17039 623 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.04
CDK9-203ENST00000480353 RTP5Q14D33 572 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 LRRC38Q5VT99 294 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 LRRC66Q68CR7 880 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 RBM44Q6ZP01 1051 aaKnown RBP15.33■□□□□ 0.04
CDK9-203ENST00000480353 BZW1Q7L1Q6 419 aaKnown RBP15.33■□□□□ 0.04
CDK9-203ENST00000480353 TSPAN33Q86UF1 283 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 VSIG1Q86XK7 387 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 FAM46DQ8NEK8 389 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 OR1E3Q8WZA6 343 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 AP2M1Q96CW1 435 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 RBM15Q96T37 977 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDK9-203ENST00000480353 LGMNQ99538 433 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 ADGRE3Q9BY15 652 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 DPEP2Q9H4A9 486 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 CARS2Q9HA77 564 aaKnown RBP15.33■□□□□ 0.04
CDK9-203ENST00000480353 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 MRPL40Q9NQ50 206 aaKnown RBP15.33■□□□□ 0.04
CDK9-203ENST00000480353 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDK9-203ENST00000480353 U3KQA8 63 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 ADAMTS20P59510 1910 aa15.33■□□□□ 0.04
CDK9-203ENST00000480353 A0A0J9YYE9 177 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 B4DGG1 531 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 KCNK1O00180 336 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 BRINP1O60477 761 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TCEA3O75764 348 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TRBC1P01850 177 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 PYGLP06737 847 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 COMTP21964 271 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TGM2P21980 687 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 LHCGRP22888 699 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TRIM23P36406 574 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 CD86P42081 329 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
CDK9-203ENST00000480353 NAP1L1P55209 391 aaKnown RBP15.32■□□□□ 0.04
CDK9-203ENST00000480353 GABREP78334 506 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 PPIDQ08752 370 aaKnown RBP15.32■□□□□ 0.04
CDK9-203ENST00000480353 ILF3Q12906 894 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDK9-203ENST00000480353 PEX6Q13608 980 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 TFDP2Q14188 446 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 CDCP2Q5VXM1 449 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 DOK6Q6PKX4 331 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 Q6ZVL8 140 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 CCDC170Q8IYT3 715 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 LSMEM2Q8N112 164 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 KYQ8NBH2 561 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 KIAA1524Q8TCG1 905 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 CCHCR1Q8TD31 782 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 PIH1D2Q8WWB5 315 aa15.32■□□□□ 0.04
CDK9-203ENST00000480353 MCCC1Q96RQ3 725 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms