RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 CHAF1BQ13112 559 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF658Q5TYW1 1059 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-208ENST00000479653 SLC30A9Q6PML9 568 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 SLC47A2Q86VL8 602 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF761Q86XN6 746 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-208ENST00000479653 NRROSQ86YC3 692 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF683Q8IZ20 524 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 GUF1Q8N442 669 aaKnown RBP11.18□□□□□ -0.62
CCDC18-208ENST00000479653 Q8NA96 180 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 GALNT6Q8NCL4 622 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 NT5C1BQ96P26 610 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 SLC38A3Q99624 504 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 LGR4Q9BXB1 951 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 ACSS2Q9NR19 701 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 MAN1B1Q9UKM7 699 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 TACC2O95359 2948 aa11.18□□□□□ -0.62
CCDC18-208ENST00000479653 TRBV23OR9-2A0A075B6M9 112 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 PRSS38A1L453 326 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ANKUB1A6NFN9 424 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 BIN1O00499 593 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 GLI1P08151 1106 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF28P17035 718 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
CCDC18-208ENST00000479653 GPLD1P80108 840 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 MAP7Q14244 749 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ERAP2Q6P179 960 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 LYSMD3Q7Z3D4 306 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 NAGSQ8N159 534 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 OR10G6Q8NH81 332 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 NCSTNQ92542 709 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
CCDC18-208ENST00000479653 VOPP1Q96AW1 172 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 SNRNP40Q96DI7 357 aaKnown RBP11.17□□□□□ -0.62
CCDC18-208ENST00000479653 STAMBPL1Q96FJ0 436 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 PCDH12Q9NPG4 1184 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 PIGVQ9NUD9 493 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ARHGEF38Q9NXL2 777 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 PDP2Q9P2J9 529 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 HPCAL4Q9UM19 191 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF451Q9Y4E5 1061 aa11.17□□□□□ -0.62
CCDC18-208ENST00000479653 SHANK1Q9Y566 2161 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 NIPBLQ6KC79 2804 aaeCLIP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 NAV3Q8IVL0 2385 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ARGFXA6NJG6 315 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 SMTNL1A8MU46 457 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 PRSS44E7EML9 344 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 MED7O43513 233 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 DPM1O60762 260 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 KRT5P13647 590 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 GNPDA1P46926 289 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF165P49910 485 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 TPM4P67936 248 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 CDK18Q07002 472 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 PDCLQ13371 301 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 BRMS1LQ5PSV4 323 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 CPZQ66K79 652 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 CISD2Q8N5K1 135 aaKnown RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 NETO2Q8NC67 525 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 C1orf74Q96LT6 269 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 GDAP1L1Q96MZ0 367 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 NCAPGQ9BPX3 1015 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ZYG11BQ9C0D3 744 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ING2Q9H160 280 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 WDR26Q9H7D7 661 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 ASF1BQ9NVP2 202 aa11.16□□□□□ -0.62
CCDC18-208ENST00000479653 PCDHGA9Q9Y5G4 932 aaKnown RBP11.16□□□□□ -0.62
CCDC18-208ENST00000479653 IGLV3-10A0A075B6K4 115 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 BECN2A8MW95 431 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 GOLGA6L19H0YKK7 550 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 PSMA7O14818 248 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 BUB1O43683 1085 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 RECQL5O94762 991 aaPredicted RBP11.15□□□□□ -0.62
CCDC18-208ENST00000479653 NFKBIAP25963 317 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 MAPK9P45984 424 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 CXCR3P49682 368 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 SUOXP51687 545 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 RNASE9P60153 205 aaKnown RBP11.15□□□□□ -0.62
CCDC18-208ENST00000479653 DEUP1Q05D60 604 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 PEX6Q13608 980 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 AGERQ15109 404 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 CHRNA6Q15825 494 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 UGP2Q16851 508 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 ANO6Q4KMQ2 910 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 CFAP58Q5T655 872 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 SLC6A19Q695T7 634 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 ZNF354CQ86Y25 554 aa11.15□□□□□ -0.62
CCDC18-208ENST00000479653 XYLT1Q86Y38 959 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms