RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 COQ5Q5HYK3 327 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 TFAP2DQ7Z6R9 452 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 HERC6Q8IVU3 1022 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 METTL25Q8N6Q8 603 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 ANKFN1Q8N957 763 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 GPATCH1Q9BRR8 931 aaKnown RBP24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 TRIM15Q9C019 465 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 MARCH4Q9P2E8 410 aaPredicted RBP24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 APPL1Q9UKG1 709 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 NUDT5Q9UKK9 219 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 PLXNA3P51805 1871 aa24.64■■□□□ 1.53
SYNGAP1-206ENST00000479510 ITGB1P05556 798 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 ETS2P15036 469 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 KCNC1P48547 511 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 NKX3-2P78367 333 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 MAP7D1Q3KQU3 841 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 SLC39A12Q504Y0 691 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 OR2T34Q8NGX1 318 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 OR2T3Q8NH03 318 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 LRTOMTQ8WZ04 291 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 KLHL5Q96PQ7 755 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PRPF18Q99633 342 aaKnown RBP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 ADAM2Q99965 735 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 TFB2MQ9H5Q4 396 aaKnown RBP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 POLR3BQ9NW08 1133 aaPredicted RBP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 ABCD2Q9UBJ2 740 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 TLL2Q9Y6L7 1015 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 DRGXA6NNA5 263 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PDLIM1O00151 329 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 VPS4BO75351 444 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 BMP2P12643 396 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 THPOP40225 353 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 YBEYP58557 167 aaPredicted RBP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 RALGDSQ12967 914 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 MTA1Q13330 715 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 CLEC6AQ6EIG7 209 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 CARM1Q86X55 608 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 FUNDC1Q8IVP5 155 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PACRGLQ8N7B6 248 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PSMG2Q969U7 264 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PTERQ96BW5 349 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 AKTIPQ9H8T0 292 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 SPC25Q9HBM1 224 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 ETAA1Q9NY74 926 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 IL37Q9NZH6 218 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PCDHGB4Q9UN71 923 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 PCDHGB5Q9Y5G0 923 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 MYO16Q9Y6X6 1858 aa24.63■■□□□ 1.53
SYNGAP1-206ENST00000479510 FAM155AB1AL88 458 aaPredicted RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 MATN4O95460 622 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 YWHAQP27348 245 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 IHHQ14623 411 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 TRIP4Q15650 581 aaPredicted RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 TMEM259Q4ZIN3 620 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 IYDQ6PHW0 289 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 RPS27LQ71UM5 84 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 ZNF598Q86UK7 904 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 POLR1EQ9GZS1 481 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 OLA1Q9NTK5 396 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 C7orf72A4D263 438 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 MOXD2PA6NHM9 499 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 AQP12BA6NM10 295 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 CD3EAPO15446 510 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 RPP40O75818 363 aaKnown RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 MAGEA11P43364 429 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 SLC7A2P52569 658 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 FOXM1Q08050 763 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 GK3PQ14409 553 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 ALFQ53S48 1182 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 KANK2Q63ZY3 851 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 KLHDC10Q6PID8 442 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 C17orf99Q6UX52 265 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 AQP12AQ8IXF9 295 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 MINDY1Q8N5J2 469 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 TSPEARQ8WU66 669 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 ABI2Q9NYB9 513 aaPredicted RBP24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 DNAJC15Q9Y5T4 150 aa24.62■■□□□ 1.53
SYNGAP1-206ENST00000479510 DOCK4Q8N1I0 1966 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 TMEM189-UBE2V1I3L0A0 370 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 AZIN1O14977 448 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 RAMP2O60895 175 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 TRPA1O75762 1119 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 CNTN5O94779 1100 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 CDK14O94921 469 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 ALDOCP09972 364 aaKnown RBP24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 HSD17B1P14061 328 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 HDCP19113 662 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 MAPKAPK2P49137 400 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 MRPL19P49406 292 aaKnown RBP24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 BNIP2Q12982 314 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 SERINC3Q13530 473 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 LPIN1Q14693 890 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 TAF1CQ15572 869 aaPredicted RBP24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 MIER2Q8N344 545 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 PGBD5Q8N414 524 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 TRPV1Q8NER1 839 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 BRSK1Q8TDC3 778 aa24.61■■□□□ 1.53
SYNGAP1-206ENST00000479510 NMD3Q96D46 503 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms