RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 C1QTNF2Q9BXJ5 285 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 TM6SF2Q9BZW4 377 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 MRPL47Q9HD33 250 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 TMEM248Q9NWD8 314 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FOXJ2Q9P0K8 574 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ZNF212Q9UDV6 495 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 CDC23Q9UJX2 597 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ITM2BQ9Y287 266 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FCF1Q9Y324 198 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 ACTL7AQ9Y615 435 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 SCINQ9Y6U3 715 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 FAM169AQ9Y6X4 670 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ITPR2Q14571 2701 aa6.71□□□□□ -1.34
VCP-205ENST00000479300 ZFC3H1O60293 1989 aaKnown RBP6.71□□□□□ -1.34
VCP-205ENST00000479300 LRP4O75096 1905 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PRAMEF33A0A0G2JMD5 474 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ARHGAP42A6NI28 874 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 LRRC10BA6NIK2 292 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 D6RAR5 112 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 LMO7DNF2Z398 122 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 AGRPO00253 132 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 EPHB6O15197 1021 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 YY2O15391 372 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 AP1G1O43747 822 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PRPSAP2O60256 369 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PRAMEF10O60809 474 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ZMPSTE24O75844 475 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 LRIG2O94898 1065 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GJB6O95452 261 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CD160O95971 181 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GP1BBP13224 206 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ADRB3P13945 408 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TSHRP16473 764 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ITIH1P19827 911 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CR2P20023 1033 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PSMA2P25787 234 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GKP32189 559 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 IGFALSP35858 605 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ACVRL1P37023 503 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ARHGAP25P42331 645 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 RABIFP47224 123 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 LIG3P49916 1009 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 SUOXP51687 545 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 THOP1P52888 689 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 CCL7P80098 99 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ARF5P84085 180 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 FANCCQ00597 558 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GUCA2AQ02747 115 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 KLHL30Q0D2K2 578 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 UBAP2LQ14157 1087 aaKnown RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 PTK2BQ14289 1009 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GRM3Q14832 879 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TCEA2Q15560 299 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 IGFBP7Q16270 282 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 WHAMMP3Q1A5X7 153 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 MYLK3Q32MK0 819 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PARP15Q460N3 678 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ZNF805Q5CZA5 627 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 HIST2H2BCQ6DN03 193 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TRNP1Q6NT89 227 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 GDPD4Q6W3E5 623 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 RAB11FIP2Q7L804 512 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TMPRSS9Q7Z410 1059 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 BNIPLQ7Z465 357 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 YTHDF3Q7Z739 585 aaKnown RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 TTC7BQ86TV6 843 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 ZFAND4Q86XD8 727 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 DTX1Q86Y01 620 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TMEM139Q8IV31 216 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CCDC50Q8IVM0 306 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 MCOLN2Q8IZK6 566 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 FBXO39Q8N4B4 442 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CCDC185Q8N715 623 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 RTL3Q8N8U3 475 aaKnown RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 OR2AP1Q8NGE2 309 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 TPCN2Q8NHX9 752 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 RNF217Q8TC41 542 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CXorf40AQ8TE69 158 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 BTN2A2Q8WVV5 523 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CENPIQ92674 756 aaPredicted RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 GLMNQ92990 594 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CCDC74AQ96AQ1 378 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PCDHB18PQ96TA0 734 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 IL12RB2Q99665 862 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 EPN3Q9H201 632 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 EPB41L5Q9HCM4 733 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 APOBEC3BQ9UH17 382 aaKnown RBP6.7□□□□□ -1.34
VCP-205ENST00000479300 FZD10Q9ULW2 581 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 PADI4Q9UM07 663 aa6.7□□□□□ -1.34
VCP-205ENST00000479300 CENPEQ02224 2701 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 LRRC53A6NM62 1247 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 C16orf96A6NNT2 1141 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 C9orf172C9J069 976 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 RASA4BC9J798 803 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FAM72CH0Y354 149 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 EEF2KO00418 725 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 NVLO15381 856 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 RASA4O43374 803 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms