RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CDC6Q99741 560 aa15.49■□□□□ 0.07
C9orf3-217ENST00000479161 GBA3Q9H227 469 aa15.49■□□□□ 0.07
C9orf3-217ENST00000479161 KCNF1Q9H3M0 494 aa15.49■□□□□ 0.07
C9orf3-217ENST00000479161 MBNL1Q9NR56 388 aaKnown RBP15.49■□□□□ 0.07
C9orf3-217ENST00000479161 KLHL8Q9P2G9 620 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-217ENST00000479161 CA5BQ9Y2D0 317 aa15.49■□□□□ 0.07
C9orf3-217ENST00000479161 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
C9orf3-217ENST00000479161 CSNK1G3Q9Y6M4 447 aa15.49■□□□□ 0.07
C9orf3-217ENST00000479161 PDE2AO00408 941 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 TNFRSF10CO14798 259 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 GCATO75600 419 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 NME1P15531 152 aaKnown RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 TSHRP16473 764 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 STC1P52823 247 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 FZD2Q14332 565 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 IRF4Q15306 451 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 CCDC70Q6NSX1 233 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 DRICH1Q6PGQ1 229 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 DARS2Q6PI48 645 aaKnown RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 KDELC1Q6UW63 502 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 PTAR1Q7Z6K3 402 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 NAXDQ8IW45 347 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 BTN2A2Q8WVV5 523 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 SPATA13Q96N96 652 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 C19orf43Q9BQ61 176 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 APOOQ9BUR5 198 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 CEP41Q9BYV8 373 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 TRABDQ9H4I3 376 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 NFKBIL1Q9UBC1 381 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-217ENST00000479161 PCOLCE2Q9UKZ9 415 aa15.48■□□□□ 0.07
C9orf3-217ENST00000479161 DCDC2BA2VCK2 349 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 PRKCGP05129 697 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 NFKB1P19838 968 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 HLA-DPA1P20036 260 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 KELP23276 732 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 HTR1BP28222 390 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 BLKP51451 505 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 THOP1P52888 689 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 GEMP55040 296 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 KIAA1024LP59773 190 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 PDE1CQ14123 709 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-217ENST00000479161 INPP5AQ14642 412 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 ACOX1Q15067 660 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 ANKRD20A2Q5SQ80 823 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 ANKRD20A1Q5TYW2 823 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 ANKRD20A3Q5VUR7 823 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 LRRC66Q68CR7 880 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 PNCKQ6P2M8 343 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 CCHCR1Q8TD31 782 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 DTX3LQ8TDB6 740 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 NUS1Q96E22 293 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 MYOCQ99972 504 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 RAD18Q9NS91 495 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 HACD3Q9P035 362 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 COQ6Q9Y2Z9 468 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 KNTC1P50748 2209 aa15.47■□□□□ 0.07
C9orf3-217ENST00000479161 NEMP2A6NFY4 417 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 H3BM21 787 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 KCNK3O14649 394 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 KCNN4O15554 427 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 SH3BP5O60239 455 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 MT-CYBP00156 380 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-217ENST00000479161 ALPIP09923 528 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TNNT3P45378 269 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-217ENST00000479161 WNT3AP56704 352 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 NFATC4Q14934 902 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 OASLQ15646 514 aaKnown RBP15.46■□□□□ 0.07
C9orf3-217ENST00000479161 CCNG2Q16589 344 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 PARP6Q2NL67 630 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 RANBP10Q6VN20 620 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 Q6ZVL8 140 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 B4GALNT4Q76KP1 1039 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 HSD11B1LQ7Z5J1 315 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TMC3Q7Z5M5 1100 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TSPAN33Q86UF1 283 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 LPCAT1Q8NF37 534 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 MRGPRX2Q96LB1 330 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TEX101Q9BY14 249 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 ARNT2Q9HBZ2 717 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 RSPH14Q9UHP6 348 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-217ENST00000479161 DGKBQ9Y6T7 804 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 LRP4O75096 1905 aa15.46■□□□□ 0.07
C9orf3-217ENST00000479161 TCRBV7S2A1N4TA0A589 114 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 CES2O00748 559 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 TPP1O14773 563 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 LIASO43766 372 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 PIAS2O75928 621 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 FGF1P05230 155 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 ITGAVP06756 1048 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 CTPS1P17812 591 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 DGKAP23743 735 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 SPINT3P49223 89 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 NOVA1P51513 510 aaKnown RBP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 DCDC1P59894 354 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 CCDC173Q0VFZ6 552 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms