RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	UBTFL6	P0CB48	400 aa	Predicted RBP	27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	PIGG	Q5H8A4	983 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	AGAP9	Q5VTM2	703 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	GPR65	Q8IYL9	337 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	OR13J1	Q8NGT2	312 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	TSPAN17	Q96FV3	270 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	ZNF512	Q96ME7	567 aa	Predicted RBP	27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	MARCH2	Q9P0N8	246 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	ARHGEF15	O94989	841 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	LTA4H	P09960	611 aa	Known RBP	27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	PEX2	P28328	305 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	BMPR1A	P36894	532 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	MAX	P61244	160 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	TNK2	Q07912	1038 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	ITK	Q08881	620 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	ZNF423	Q2M1K9	1284 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	TCEAL8	Q8IYN2	117 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	TEX26	Q8N6G2	289 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	KLHL5	Q96PQ7	755 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	CDRT15	Q96T59	188 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	OLA1	Q9NTK5	396 aa	Known RBP	27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	INSL5	Q9Y5Q6	135 aa		27.58	■■■□□ 2.01
CHKB-208	ENST00000479003	IGLV3-10	A0A075B6K4	115 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	NEMP2	A6NFY4	417 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	PEX1	O43933	1283 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	MYOG	P15173	224 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	ERVFC1	P60507	584 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	RFTN1	Q14699	578 aa	Predicted RBP	27.57	■■■□□ 2
CHKB-208	ENST00000479003	ALF	Q53S48	1182 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	CEP70	Q8NHQ1	597 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	SP110	Q9HB58	689 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	SPATS2L	Q9NUQ6	558 aa	Known RBP	27.57	■■■□□ 2
CHKB-208	ENST00000479003	PACSIN3	Q9UKS6	424 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	PSMD13	Q9UNM6	376 aa		27.57	■■■□□ 2
CHKB-208	ENST00000479003	LINC01553	A4QN01	128 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	TGM5	O43548	720 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	CNTN5	O94779	1100 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	DSC2	Q02487	901 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	SULT2A1	Q06520	285 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	IHH	Q14623	411 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	LRRC36	Q1X8D7	754 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	C9orf50	Q5SZB4	431 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	FAR2	Q96K12	515 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	MARK4	Q96L34	752 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	TCF25	Q9BQ70	676 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	C17orf80	Q9BSJ5	609 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	EFCAB1	Q9HAE3	211 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	GTSE1	Q9NYZ3	720 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003		A8MT66	165 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	SLC7A4	O43246	635 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	CXCL14	O95715	111 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	RBP1	P09455	135 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	THOP1	P52888	689 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	CREM	Q03060	361 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	PLD1	Q13393	1074 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	TRIP10	Q15642	601 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	HECTD2	Q5U5R9	776 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	CILP2	Q8IUL8	1156 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	PELI3	Q8N2H9	469 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	TADA1	Q96BN2	335 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	UBXN10	Q96LJ8	280 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	MTIF3	Q9H2K0	278 aa	Known RBP	27.56	■■■□□ 2
CHKB-208	ENST00000479003	BPTF	Q12830	3046 aa		27.56	■■■□□ 2
CHKB-208	ENST00000479003	CEP290	O15078	2479 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	ZNF840P	A6NDX5	716 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	MROH6	A6NGR9	719 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	IPO13	O94829	963 aa	Known RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	HNRNPL	P14866	589 aa	Known RBP eCLIP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	KLC3	Q6P597	504 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	ATP6V0D2	Q8N8Y2	350 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	PABPC5	Q96DU9	382 aa	Known RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	MYRFL	Q96LU7	910 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	MFSD1	Q9H3U5	465 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	GRXCR1	A8MXD5	290 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	HMBS	P08397	361 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	CCDC166	P0CW27	439 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	UQCRB	P14927	111 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	KCNA5	P22460	613 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	RPL26	P61254	145 aa	Known RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	ACAP2	Q15057	778 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	TRIP4	Q15650	581 aa	Predicted RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	PSMG2	Q969U7	264 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	WDR41	Q9HAD4	459 aa		27.55	■■■□□ 2
CHKB-208	ENST00000479003	C6orf203	Q9P0P8	240 aa	Predicted RBP	27.55	■■■□□ 2
CHKB-208	ENST00000479003	SLC12A8	A0AV02	714 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	TCAF2	A6NFQ2	919 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	WISP3	O95389	354 aa	Predicted RBP	27.54	■■■□□ 2
CHKB-208	ENST00000479003	AQP4	P55087	323 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	TAF12	Q16514	161 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	OGFRL1	Q5TC84	451 aa	Predicted RBP	27.54	■■■□□ 2
CHKB-208	ENST00000479003	RNF220	Q5VTB9	566 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	CHSY3	Q70JA7	882 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	RNF135	Q8IUD6	432 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	PHC3	Q8NDX5	983 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	PDZD8	Q8NEN9	1154 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	OVCA2	Q8WZ82	227 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	SH3GL3	Q99963	347 aa		27.54	■■■□□ 2
CHKB-208	ENST00000479003	EML4	Q9HC35	981 aa	Known RBP	27.54	■■■□□ 2
CHKB-208	ENST00000479003	BCAP29	Q9UHQ4	241 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms