RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SERPINA4P29622 427 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 PTPN9P43378 593 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 CD97P48960 835 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 HDAC4P56524 1084 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 POLR2LP62875 67 aaKnown RBP17.19■□□□□ 0.34
VIM-204ENST00000478746 ACOX1Q15067 660 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 AFMIDQ63HM1 303 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 SLC30A9Q6PML9 568 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 SLFN11Q7Z7L1 901 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 SRLQ86TD4 932 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 NOP9Q86U38 636 aaKnown RBP17.19■□□□□ 0.34
VIM-204ENST00000478746 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 PAF1Q8N7H5 531 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 JOSD2Q8TAC2 188 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 FAM172AQ8WUF8 416 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 PATE1Q8WXA2 126 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 NTAN1Q96AB6 310 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 TEFMQ96QE5 360 aaKnown RBP17.19■□□□□ 0.34
VIM-204ENST00000478746 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
VIM-204ENST00000478746 CREBBPQ92793 2442 aa17.19■□□□□ 0.34
VIM-204ENST00000478746 A8MX80 341 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 FUCA1P04066 466 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 CEACAM5P06731 702 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 MYCLP1P12525 358 aaPredicted RBP17.18■□□□□ 0.34
VIM-204ENST00000478746 GM2AP17900 193 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 OAS2P29728 719 aaKnown RBP17.18■□□□□ 0.34
VIM-204ENST00000478746 GNPDA1P46926 289 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 CSNK1DP48730 415 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 MC1RQ01726 317 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 PEX6Q13608 980 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 TMEM71Q6P5X7 295 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 UNC5BQ8IZJ1 945 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 NAGSQ8N159 534 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 UMODL1-AS1Q8N2C9 162 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 TEX19Q8NA77 164 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 SPRY4Q9C004 299 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 CATSPERBQ9H7T0 1116 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 PHPT1Q9NRX4 125 aaPredicted RBP17.18■□□□□ 0.34
VIM-204ENST00000478746 KCNK4Q9NYG8 393 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 TMEM9Q9P0T7 183 aa17.18■□□□□ 0.34
VIM-204ENST00000478746 WASH4PA8MWX3 477 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 J3KR12 359 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 CREB3O43889 395 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 TCN2P20062 427 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 CSF2RBP32927 897 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
VIM-204ENST00000478746 BCL2L1Q07817 233 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 ABHD18Q0P651 414 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 DPY19L2P1Q6NXN4 242 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 C16orf46Q6P387 395 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 DPPA4Q7L190 304 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 KDELC2Q7Z4H8 507 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 BMPERQ8N8U9 685 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 RTP4Q96DX8 246 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 AHCYL2Q96HN2 611 aaKnown RBP17.17■□□□□ 0.34
VIM-204ENST00000478746 ZMYND15Q9H091 742 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 UNC79Q9P2D8 2635 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 PLEKHB1Q9UF11 243 aaPredicted RBP17.17■□□□□ 0.34
VIM-204ENST00000478746 SUFUQ9UMX1 484 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 TP53TG5Q9Y2B4 290 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 FHOD1Q9Y613 1164 aa17.17■□□□□ 0.34
VIM-204ENST00000478746 KRT7P08729 469 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 MMP8P22894 467 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 MAN1A1P33908 653 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 RGRP47804 291 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 MLLT10P55197 1068 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 CTBSQ01459 385 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 MC2RQ01718 297 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 KLHDC7AQ5VTJ3 777 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 SCYL2Q6P3W7 929 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 CEACAM20Q6UY09 585 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 TIPARPQ7Z3E1 657 aaKnown RBP17.16■□□□□ 0.34
VIM-204ENST00000478746 HEATR4Q86WZ0 1026 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
VIM-204ENST00000478746 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 CTRCQ99895 268 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 ZPBPQ9BS86 351 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 TEX101Q9BY14 249 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 TRIT1Q9H3H1 467 aaKnown RBP17.16■□□□□ 0.34
VIM-204ENST00000478746 PDFQ9HBH1 243 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 PDP2Q9P2J9 529 aa17.16■□□□□ 0.34
VIM-204ENST00000478746 RP1L1Q8IWN7 2480 aaPredicted RBP17.15■□□□□ 0.34
VIM-204ENST00000478746 A8MU76 341 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 PRAMEF11O60813 436 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 PALMO75781 387 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 KRT3P12035 628 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 ERCC5P28715 1186 aaPredicted RBP17.15■□□□□ 0.34
VIM-204ENST00000478746 ADCY8P40145 1251 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 GPLD1P80108 840 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 CRTC2Q53ET0 693 aaPredicted RBP17.15■□□□□ 0.34
VIM-204ENST00000478746 SNAP47Q5SQN1 464 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 SLC30A5Q8TAD4 765 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 EPS8L1Q8TE68 723 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 STARD8Q92502 1023 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 NUS1Q96E22 293 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 COQ10AQ96MF6 247 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 FRMD8Q9BZ67 464 aaPredicted RBP17.15■□□□□ 0.34
VIM-204ENST00000478746 NDST4Q9H3R1 872 aa17.15■□□□□ 0.34
VIM-204ENST00000478746 KCTD5Q9NXV2 234 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms