RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PCDHA7Q9UN72 937 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC45A1Q9Y2W3 748 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 PSAT1Q9Y617 370 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 MON2Q7Z3U7 1717 aa4.24□□□□□ -1.73
CDC42BPA-212ENST00000478573 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 RPS10-NUDT3A0A1W2PQS6 291 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 A6NCN8 305 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 CBY3A6NI87 242 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 FOXO6A8MYZ6 492 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 RHODO00212 210 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 KIF1CO43896 1103 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 DOK2O60496 412 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TACC1O75410 805 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 CBX6O95503 412 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 HEXAP06865 529 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 HSP90AA1P07900 732 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 FMO4P31512 558 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 ICAM3P32942 547 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARL3P36405 182 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 EFNA5P52803 228 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 ARSFP54793 590 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 NEXNQ0ZGT2 675 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 PKP1Q13835 747 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 ME3Q16798 604 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TTC39AQ5SRH9 613 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TTLL5Q6EMB2 1281 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 CDC73Q6P1J9 531 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TRIM74Q86UV6 250 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TRIM73Q86UV7 250 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 IGFN1Q86VF2 1251 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 NEK9Q8TD19 979 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 SNRNP27Q8WVK2 155 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 RSRC1Q96IZ7 334 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 PIP5K1AQ99755 562 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 ZNF304Q9HCX3 659 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 SNTG1Q9NSN8 517 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 RNF146Q9NTX7 359 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 NCKIPSDQ9NZQ3 722 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 GPR34Q9UPC5 381 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 NRKQ7Z2Y5 1582 aa4.23□□□□□ -1.73
CDC42BPA-212ENST00000478573 TULP4Q9NRJ4 1543 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAM157AC9JC47 383 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 EBAG9O00559 213 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 RNMTO43148 476 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 EIF5BO60841 1220 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 TIPRLO75663 272 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 GFPT2O94808 682 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 TMCC1O94876 653 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 IL1AP01583 271 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CENPBP07199 599 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 ACAA1P09110 424 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 FGF3P11487 239 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 ZNF8P17098 575 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CDH2P19022 906 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 YWHAQP27348 245 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 TM4SF1P30408 202 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 MAPK4P31152 587 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 HOXD13P35453 343 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 GABRB2P47870 512 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CENPAP49450 140 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CTCFP49711 727 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CLCNKBP51801 687 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 YWHAZP63104 245 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC18A2Q05940 514 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 KCTD2Q14681 263 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 CCNG2Q16589 344 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 GSTA3Q16772 222 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 SYTL3Q4VX76 610 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 ATG9BQ674R7 924 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 TXNDC8Q6A555 127 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 AAGABQ6PD74 315 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLC46A3Q7Z3Q1 461 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 KDELC2Q7Z4H8 507 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 RPAP2Q8IXW5 612 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 OR4N2Q8NGD1 307 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 GDPD5Q8WTR4 605 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 USP6NLQ92738 828 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 NSUN4Q96CB9 384 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 PERPQ96FX8 193 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 FAM84BQ96KN1 310 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 WDR83Q9BRX9 315 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 STRA6Q9BX79 667 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 GHITMQ9H3K2 345 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 SPAG4Q9NPE6 437 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 PCDHB16Q9NRJ7 776 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 BABAM1Q9NWV8 329 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 SLCO3A1Q9UIG8 710 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 MYO6Q9UM54 1294 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 LAMP3Q9UQV4 416 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 PCDHGB5Q9Y5G0 923 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 LYVE1Q9Y5Y7 322 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 METP08581 1390 aa4.22□□□□□ -1.73
CDC42BPA-212ENST00000478573 LRPPRCP42704 1394 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms