RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 PCDHB11Q9Y5F2 797 aa12.8□□□□□ -0.36
TDP2-204ENST00000478507 STMND1H3BQB6 276 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 PALMO75781 387 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 BCL2L1Q07817 233 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 RFTN1Q14699 578 aaPredicted RBP12.79□□□□□ -0.36
TDP2-204ENST00000478507 KRT31Q15323 416 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
TDP2-204ENST00000478507 COLEC12Q5KU26 742 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 ARHGAP36Q6ZRI8 547 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 CYP4V2Q6ZWL3 525 aaPredicted RBP12.79□□□□□ -0.36
TDP2-204ENST00000478507 RCBTB1Q8NDN9 531 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 FRMD8Q9BZ67 464 aaPredicted RBP12.79□□□□□ -0.36
TDP2-204ENST00000478507 VPS16Q9H269 839 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 ADNPQ9H2P0 1102 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 TRNAU1APQ9NX07 287 aaKnown RBP12.79□□□□□ -0.36
TDP2-204ENST00000478507 DONSONQ9NYP3 566 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 TAAR2Q9P1P5 351 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 B4GALT6Q9UBX8 382 aa12.79□□□□□ -0.36
TDP2-204ENST00000478507 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 PDE2AO00408 941 aaPredicted RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 HTRA2O43464 458 aaPredicted RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 ECEL1O95672 775 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 CR2P20023 1033 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 CSF2RBP32927 897 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 GPR3P46089 330 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 LIMK2P53671 638 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 AP1S1P61966 158 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 TLE1Q04724 770 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 TRA2AQ13595 282 aaKnown RBP eCLIP12.78□□□□□ -0.36
TDP2-204ENST00000478507 CNGA3Q16281 694 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 AMZ1Q400G9 498 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 RFX8Q6ZV50 586 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 HEATR4Q86WZ0 1026 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 NAGSQ8N159 534 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 ZDHHC1Q8WTX9 485 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 PATE1Q8WXA2 126 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 JPH3Q8WXH2 748 aaPredicted RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 NUS1Q96E22 293 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 SCARF2Q96GP6 870 aaPredicted RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 CCDC74BQ96LY2 380 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 TAAR9Q96RI9 348 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 SYT11Q9BT88 431 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 CINPQ9BW66 212 aaPredicted RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 CDH19Q9H159 772 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 CARS2Q9HA77 564 aaKnown RBP12.78□□□□□ -0.36
TDP2-204ENST00000478507 AP4E1Q9UPM8 1137 aa12.78□□□□□ -0.36
TDP2-204ENST00000478507 RHPN2P1A8MT19 583 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 A8MX80 341 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 PPM1DO15297 605 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 TEX33O43247 280 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
TDP2-204ENST00000478507 PEX11BO96011 259 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 THRAP10827 490 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 ERCC2P18074 760 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 LHCGRP22888 699 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 AK4P27144 223 aaPredicted RBP12.77□□□□□ -0.37
TDP2-204ENST00000478507 TEAD1P28347 426 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 ALDH4A1P30038 563 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 UGT1A3P35503 534 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 CDK3Q00526 305 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 IL10RBQ08334 325 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 ILF3Q12906 894 aaKnown RBP eCLIP12.77□□□□□ -0.37
TDP2-204ENST00000478507 ACOX1Q15067 660 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 BORAQ6PGQ7 559 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 TP53INP2Q8IXH6 220 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 MCOLN2Q8IZK6 566 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 OR4D9Q8NGE8 314 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 DTD2Q96FN9 168 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 AGPAT1Q99943 283 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.37
TDP2-204ENST00000478507 DDA1Q9BW61 102 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 GSDMCQ9BYG8 508 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 AKAP7Q9P0M2 348 aaPredicted RBP12.77□□□□□ -0.37
TDP2-204ENST00000478507 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 TUBD1Q9UJT1 453 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 SUFUQ9UMX1 484 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 SLC17A4Q9Y2C5 497 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 B3GALT1Q9Y5Z6 326 aa12.77□□□□□ -0.37
TDP2-204ENST00000478507 USP9YO00507 2555 aaPredicted RBP12.77□□□□□ -0.37
TDP2-204ENST00000478507 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 TTC24A2A3L6 582 aaPredicted RBP12.76□□□□□ -0.37
TDP2-204ENST00000478507 CLEC18AA5D8T8 446 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 ANKRD62A6NC57 917 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
TDP2-204ENST00000478507 SOCS5O75159 536 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 SOD1P00441 154 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 IVLP07476 585 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 LIFP15018 202 aa12.76□□□□□ -0.37
TDP2-204ENST00000478507 ATP1A2P50993 1020 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms