RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TRNAU1APQ9NX07 287 aaKnown RBP13.01□□□□□ -0.33
ABCF3-212ENST00000478288 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
ABCF3-212ENST00000478288 LRIT1Q9P2V4 623 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 B4GALT6Q9UBX8 382 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 PISDQ9UG56 409 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 PCSK1NQ9UHG2 260 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 SCINQ9Y6U3 715 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
ABCF3-212ENST00000478288 A0A1W2PQC6 194 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 ZW10O43264 779 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 EFSO43281 561 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 CPNE6O95741 557 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 PEX11BO96011 259 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 MYBL1P10243 752 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 CCNB1P14635 433 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 PRKCIP41743 596 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 ARHGEF7Q14155 803 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 ZNF235Q14590 738 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 ACOX1Q15067 660 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 JAMLQ86YT9 394 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 CBARPQ8N350 705 aaPredicted RBP13□□□□□ -0.33
ABCF3-212ENST00000478288 PAF1Q8N7H5 531 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 SGF29Q96ES7 293 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 DTD2Q96FN9 168 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 NSMCE3Q96MG7 304 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 MCCC1Q96RQ3 725 aaPredicted RBP13□□□□□ -0.33
ABCF3-212ENST00000478288 NUDCD1Q96RS6 583 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 GSDMCQ9BYG8 508 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 DPEP2Q9H4A9 486 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 CYP4F12Q9HCS2 524 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 MRPL47Q9HD33 250 aaKnown RBP13□□□□□ -0.33
ABCF3-212ENST00000478288 MRPL40Q9NQ50 206 aaKnown RBP13□□□□□ -0.33
ABCF3-212ENST00000478288 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
ABCF3-212ENST00000478288 AIPL1Q9NZN9 384 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
ABCF3-212ENST00000478288 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 TMCO5BA8MYB1 307 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 B4DGG1 531 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 H3BRJ5 948 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 HEXIM1O94992 359 aaKnown RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 HGFP14210 728 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 VIPR1P32241 457 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 GPR3P46089 330 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 B4GALNT1Q00973 533 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 DPTQ07507 201 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 ILF3Q12906 894 aaKnown RBP eCLIP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 CNGA3Q16281 694 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 BOLA3Q53S33 107 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 HEATR4Q86WZ0 1026 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 DTX1Q86Y01 620 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 PELI3Q8N2H9 469 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 BBS5Q8N3I7 341 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 Q8N9G6 341 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 GBP4Q96PP9 640 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 BPIFA3Q9BQP9 254 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 FRMD8Q9BZ67 464 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 AKAP7Q9P0M2 348 aaPredicted RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 CNOT8Q9UFF9 292 aaKnown RBP12.99□□□□□ -0.33
ABCF3-212ENST00000478288 PHTF1Q9UMS5 762 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 SLC17A4Q9Y2C5 497 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 PPIL1Q9Y3C6 166 aa12.99□□□□□ -0.33
ABCF3-212ENST00000478288 PRAMEF33A0A0G2JMD5 474 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 MAFKO60675 156 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 PRAMEF10O60809 474 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CPP00450 1065 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CEACAM5P06731 702 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 IVLP07476 585 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CYP2A6P11509 494 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 SERPINB6P35237 376 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 ARL4AP40617 200 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CDH6P55285 790 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CDK3Q00526 305 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 SQSTM1Q13501 440 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TRA2AQ13595 282 aaKnown RBP eCLIP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 ASIC2Q16515 512 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TMEM164Q5U3C3 297 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 ZNF571Q7Z3V5 609 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TMPRSS9Q7Z410 1059 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 PIM3Q86V86 326 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 NRROSQ86YC3 692 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CCL4L1Q8NHW4 92 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 ZDHHC1Q8WTX9 485 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 SCRN2Q96FV2 425 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 SCARF2Q96GP6 870 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TRIM7Q9C029 511 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 NAT10Q9H0A0 1025 aaKnown RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 HAUS4Q9H6D7 363 aa12.98□□□□□ -0.33
ABCF3-212ENST00000478288 CARS2Q9HA77 564 aaKnown RBP12.98□□□□□ -0.33
ABCF3-212ENST00000478288 TAAR2Q9P1P5 351 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms