RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 H3BNX3 289 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 RHODO00212 210 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 LINC01565O15544 149 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 KINO60870 393 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 NBNO60934 754 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 ATG13O75143 517 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 NDUFB8O95169 186 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 NTN1O95631 604 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 MMP1P03956 469 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 UQCRFS1P1P0C7P4 283 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 SERPINA4P29622 427 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 ADORA1P30542 326 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 OAZ1P54368 228 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 ADPRHP54922 357 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 FOXO1Q12778 655 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 PWP2Q15269 919 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 TUBB8Q3ZCM7 444 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 PIK3CD-AS1Q5SR53 167 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 C10orf76Q5T2E6 689 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 GORABQ5T7V8 394 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 TANGO2Q6ICL3 276 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 KIAA1324Q6UXG2 1013 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS50-214ENST00000477935 DCLK2Q8N568 766 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 FAM133AQ8N9E0 248 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 SLC2A12Q8TD20 617 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 OTUD7AQ8TE49 926 aaPredicted RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 P2RX5Q93086 422 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 NLRP4Q96MN2 994 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 NECTIN4Q96NY8 510 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 RPS6KC1Q96S38 1066 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 CDCA3Q99618 268 aaPredicted RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 MAGEH1Q9H213 219 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 IL21RQ9HBE5 538 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 PDE11AQ9HCR9 933 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 SEPSECSQ9HD40 501 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 DECR2Q9NUI1 292 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 TNFSF13BQ9Y275 285 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 SQORQ9Y6N5 450 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 CEP295Q9C0D2 2601 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 ZNFX1Q9P2E3 1918 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 COL4A4P53420 1690 aaPredicted RBP4.96□□□□□ -1.61
VPS50-214ENST00000477935 TMEM272A0A1B0GTI8 110 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 A6NNC1 897 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 EPN2O95208 641 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 TOMM40O96008 361 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 CHRNB1P11230 501 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 HOXB8P17481 243 aaPredicted RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 SCP2P22307 547 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 CTNNB1P35222 781 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 PCP4P48539 62 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 POLGP54098 1239 aaPredicted RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 GABPAQ06546 454 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 GALNT3Q14435 633 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 ARL13AQ5H913 290 aaPredicted RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 C6orf10Q5SRN2 563 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 C10orf62Q5T681 223 aaPredicted RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 ASPHD1Q5U4P2 390 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 TMEM184AQ6ZMB5 413 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 RFX8Q6ZV50 586 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 B4GALNT4Q76KP1 1039 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 ENDOVQ8N8Q3 282 aaKnown RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 ENAHQ8N8S7 591 aaPredicted RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 C9orf106Q8NAJ2 232 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 SUMF1Q8NBK3 374 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 SEPT8Q92599 483 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 SLC25A28Q96A46 364 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 NEK1Q96PY6 1258 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 NPAS1Q99742 590 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 SLF1Q9BQI6 1058 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 DDX23Q9BUQ8 820 aaKnown RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 NDUFAF4Q9P032 175 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 GRHPRQ9UBQ7 328 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 FBXO4Q9UKT5 387 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 RIPK3Q9Y572 518 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 R4GN57 208 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 HELZ2Q9BYK8 2649 aaKnown RBP4.96□□□□□ -1.62
VPS50-214ENST00000477935 CDK5RAP2Q96SN8 1893 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 TET1Q8NFU7 2136 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 IL16Q14005 1332 aa4.96□□□□□ -1.62
VPS50-214ENST00000477935 SIP14410 1827 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 BPTFQ12830 3046 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 FOXO6A8MYZ6 492 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 B4DGG1 531 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 KCNJ18B7U540 433 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 SLC30A4O14863 429 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 MSI1O43347 362 aaKnown RBP4.95□□□□□ -1.62
VPS50-214ENST00000477935 PI15O43692 258 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 CYP21A2P08686 494 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 NRIP1P48552 1158 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 LINC00205P59089 165 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 OS9Q13438 667 aaPredicted RBP4.95□□□□□ -1.62
VPS50-214ENST00000477935 CAMK1Q14012 370 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 KRT72Q14CN4 511 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms