RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TAF3Q5VWG9 929 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 PNCKQ6P2M8 343 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 STRADAQ7RTN6 431 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 CAMK1DQ8IU85 385 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 NRSN1Q8IZ57 195 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 UNC5BQ8IZJ1 945 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 PATE1Q8WXA2 126 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 STARD8Q92502 1023 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 NTAN1Q96AB6 310 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 UBA2Q9UBT2 640 aaPredicted RBP20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 BIN1O00499 593 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 PPM1DO15297 605 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 AGFG2O95081 481 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 KRT7P08729 469 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 EPHB2P29323 1055 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 PTPN9P43378 593 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 MLLT10P55197 1068 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 RAPGEF1Q13905 1077 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 AFMIDQ63HM1 303 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 SLC30A9Q6PML9 568 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 DPPA4Q7L190 304 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 NAGSQ8N159 534 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 RXFP2Q8WXD0 754 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 ECHDC3Q96DC8 303 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 ATP13A3Q9H7F0 1226 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 SUDS3Q9H7L9 328 aaPredicted RBP20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 PDFQ9HBH1 243 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 KCNK4Q9NYG8 393 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 PDP2Q9P2J9 529 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 ABCA12Q86UK0 2595 aa20.26■□□□□ 0.83
PDLIM1-202ENST00000477757 RP1L1Q8IWN7 2480 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 C2CD4BA6NLJ0 364 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 CEACAM5P06731 702 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 NR1D1P20393 614 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 AK4P27144 223 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 SERPINA4P29622 427 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 UQCRFS1P47985 274 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 HDAC4P56524 1084 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 GPLD1P80108 840 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 ATP1A1-AS1Q5TC04 95 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 NAA35Q5VZE5 725 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 TMEM71Q6P5X7 295 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 TIPARPQ7Z3E1 657 aaKnown RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 UMODL1-AS1Q8N2C9 162 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 GPT2Q8TD30 523 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 CPA5Q8WXQ8 436 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 CENPIQ92674 756 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 ZPBPQ9BS86 351 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 FRMD8Q9BZ67 464 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 PHPT1Q9NRX4 125 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 TMEM184BQ9Y519 407 aaPredicted RBP20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 KCTD3Q9Y597 815 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 ST14Q9Y5Y6 855 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 KCNMB2Q9Y691 235 aa20.25■□□□□ 0.83
PDLIM1-202ENST00000477757 TEX33O43247 280 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 FUCA1P04066 466 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 TCN2P20062 427 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 MAN1A1P33908 653 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 CSNK1DP48730 415 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 MC2RQ01718 297 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 PEX6Q13608 980 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 NOP9Q86U38 636 aaKnown RBP20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 HEATR4Q86WZ0 1026 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 CREBRFQ8IUR6 639 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 FAM172AQ8WUF8 416 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 TEX101Q9BY14 249 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 ZMYND15Q9H091 742 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 TRIT1Q9H3H1 467 aaKnown RBP20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 SUFUQ9UMX1 484 aa20.24■□□□□ 0.83
PDLIM1-202ENST00000477757 WASH4PA8MWX3 477 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 GNPDA1P46926 289 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 RGRP47804 291 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 CTBSQ01459 385 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 CAPRIN2Q6IMN6 1127 aaKnown RBP20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 TCTN3Q6NUS6 607 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 DPY19L2P1Q6NXN4 242 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 CEACAM20Q6UY09 585 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 PYROXD2Q8N2H3 581 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 TEX19Q8NA77 164 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 JOSD2Q8TAC2 188 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 NUS1Q96E22 293 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 COQ10AQ96MF6 247 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 CELSR2Q9HCU4 2923 aa20.23■□□□□ 0.83
PDLIM1-202ENST00000477757 MKRN2OSH3BPM6 223 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 K7EM74 188 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 STK17BO94768 372 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 MMEP08473 750 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 STAT5AP42229 794 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 COPB1P53618 953 aaKnown RBP20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 ACOX1Q15067 660 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 FHL5Q5TD97 284 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 C16orf46Q6P387 395 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 KDELC2Q7Z4H8 507 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 SRLQ86TD4 932 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 GALNT11Q8NCW6 608 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 SSC4DQ8WTU2 575 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 PTCD2Q8WV60 388 aaKnown RBP20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 CTRCQ99895 268 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 PRDM8Q9NQV8 689 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms