RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 DCBLD1Q8N8Z6 715 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 CCNYQ8ND76 341 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 LRRN4Q8WUT4 740 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 RNF25Q96BH1 459 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 NUS1Q96E22 293 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 BRD8Q9H0E9 1235 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 KLQ9UEF7 1012 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 RPL26L1Q9UNX3 145 aaKnown RBP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 HYOU1Q9Y4L1 999 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 HEY1Q9Y5J3 304 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TMEM202A6NGA9 273 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 CACNB4O00305 520 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-211ENST00000477612 TNFP01375 233 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 KRT1P04264 644 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 ANXA6P08133 673 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 ALPIP09923 528 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 MYF5P13349 255 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 KRT10P13645 584 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 ZNF30P17039 623 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 CDKN2BP42772 138 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 NOP2P46087 812 aaKnown RBP21.76■■□□□ 1.07
COL9A3-211ENST00000477612 DPTQ07507 201 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 ARHGEF7Q14155 803 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 PDK1Q15118 436 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 SPA17Q15506 151 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 MFSD7Q6UXD7 560 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 HSD11B1LQ7Z5J1 315 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 OR56A4Q8NGH8 313 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 MDM1Q8TC05 714 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 LYSMD1Q96S90 227 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 RBM15Q96T37 977 aaKnown RBP eCLIP21.76■■□□□ 1.07
COL9A3-211ENST00000477612 LGR4Q9BXB1 951 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 TEX101Q9BY14 249 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 NRSN2Q9GZP1 204 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 LUC7LQ9NQ29 371 aaKnown RBP21.76■■□□□ 1.07
COL9A3-211ENST00000477612 CLCA2Q9UQC9 943 aa21.76■■□□□ 1.07
COL9A3-211ENST00000477612 EPN1Q9Y6I3 576 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-211ENST00000477612 ANKRD11Q6UB99 2663 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-211ENST00000477612 PDE2AO00408 941 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-211ENST00000477612 SPOPO43791 374 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 OPA1O60313 960 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 JCHAINP01591 159 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 MMP2P08253 660 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 CTSEP14091 401 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 CTPS1P17812 591 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 CA4P22748 312 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 PTPRRQ15256 657 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 CRTC1Q6UUV9 634 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 NYAP1Q6ZVC0 841 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 Q6ZVL8 140 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 TSPAN33Q86UF1 283 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 TMTC1Q8IUR5 882 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 GLMNQ92990 594 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 WDR26Q9H7D7 661 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 DNPEPQ9ULA0 475 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 CHKBQ9Y259 395 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 LAMA5O15230 3695 aa21.75■■□□□ 1.07
COL9A3-211ENST00000477612 APC2O95996 2303 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 KCNK1O00180 336 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 PPP1R12AO14974 1030 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 NDUFA10O95299 355 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 MT-CO3P00414 261 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 CELA2BP08218 269 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 MYCLP1P12525 358 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 ETV3P41162 512 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 NR2C2P49116 596 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 PTSQ03393 145 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 ZBTB17Q13105 803 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 RTP5Q14D33 572 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 NR0B2Q15466 257 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 ODF2Q5BJF6 829 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 KCTD16Q68DU8 428 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 C11orf63Q6NUN7 778 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 NPNTQ6UXI9 565 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 BZW1Q7L1Q6 419 aaKnown RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 RFX6Q8HWS3 928 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 SLC35F3Q8IY50 421 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 IFI44Q8TCB0 444 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 OR1E3Q8WZA6 343 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 PDXPQ96GD0 296 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 CALR3Q96L12 384 aaKnown RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 PCDH9Q9HC56 1237 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 FGF22Q9HCT0 170 aa21.74■■□□□ 1.07
COL9A3-211ENST00000477612 ZFC3H1O60293 1989 aaKnown RBP21.74■■□□□ 1.07
COL9A3-211ENST00000477612 CFAP47Q6ZTR5 3102 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 CAPN8A6NHC0 703 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 RPIAP49247 311 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 SKOR1P84550 965 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 CYP4F3Q08477 520 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 AP1B1Q10567 949 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 TFDP2Q14188 446 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 LRRC66Q68CR7 880 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 GUSBP11Q6P575 273 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 RD3Q7Z3Z2 195 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 GKN2Q86XP6 184 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 KATNAL2Q8IYT4 538 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 SCG3Q8WXD2 468 aaKnown RBP21.73■■□□□ 1.07
COL9A3-211ENST00000477612 SMIM14Q96QK8 99 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 PHPT1Q9NRX4 125 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms