RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIM63Q969Q1 353 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 GCC1Q96CN9 775 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 IGSF21Q96ID5 467 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 DUX5Q96PT3 197 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 IFT27Q9BW83 186 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 CHMP4BQ9H444 224 aaKnown RBP4.26□□□□□ -1.73
UBR3-209ENST00000477461 TCF7L2Q9NQB0 619 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 ITM2CQ9NQX7 267 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 MALT1Q9UDY8 824 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 KLQ9UEF7 1012 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 SRPRBQ9Y5M8 271 aaKnown RBP4.26□□□□□ -1.73
UBR3-209ENST00000477461 RAI2Q9Y5P3 530 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 DGKBQ9Y6T7 804 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 RREB1Q92766 1687 aa4.26□□□□□ -1.73
UBR3-209ENST00000477461 AFDNP55196 1824 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 ARFGEF2Q9Y6D5 1785 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 PI4KAP2A4QPH2 592 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 KDM4EB2RXH2 506 aaPredicted RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 EYA2O00167 538 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 BUB3O43684 328 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SNRNP70P08621 437 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 CNPP09543 421 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 TCEA1P23193 301 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 CLCNKBP51801 687 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 RBM5P52756 815 aaKnown RBP eCLIP4.25□□□□□ -1.73
UBR3-209ENST00000477461 EIF5P55010 431 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 DLX5P56178 289 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 HSP90AB3PQ58FF7 597 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 NUP188Q5SRE5 1749 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 UBR3Q6ZT12 1888 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SERPINA11Q86U17 422 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 FOXP4Q8IVH2 680 aaPredicted RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 ITPRIPQ8IWB1 547 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SCN4BQ8IWT1 228 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SUGP1Q8IWZ8 645 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 EXOC8Q8IYI6 725 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 PI4KAP1Q8N8J0 262 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 LILRB1Q8NHL6 650 aaPredicted RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 DNAAF4Q8WXU2 420 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 GOLGA1Q92805 767 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SCLT1Q96NL6 688 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 NODALQ96S42 347 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 CADM1Q9BY67 442 aaKnown RBP4.25□□□□□ -1.73
UBR3-209ENST00000477461 PLEKHA2Q9HB19 425 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 SEL1LQ9UBV2 794 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 NUP98P52948 1817 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 ANKRD36CQ5JPF3 1778 aa4.25□□□□□ -1.73
UBR3-209ENST00000477461 MAP3K15Q6ZN16 1313 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 TMEM247A6NEH6 219 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ERVV-1B6SEH8 477 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 NPHP1O15259 732 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 SLC16A5O15375 505 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 CBX6O95503 412 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 METTL18O95568 372 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 DDAH2O95865 285 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 IGLV2-11P01706 119 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ACP5P13686 325 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 C21orf33P30042 268 aaPredicted RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 AVPR2P30518 371 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 DPP6P42658 865 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 RPS6KA3P51812 740 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 HILS1P60008 231 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 IRX6P78412 446 aaPredicted RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 POU3F1Q03052 451 aaPredicted RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 PDCLQ13371 301 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 CTTNQ14247 550 aaKnown RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 TAF5Q15542 800 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 SLC15A2Q16348 729 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 GXYLT1Q4G148 440 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ZNF484Q5JVG2 852 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ANKRD45Q5TZF3 282 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 TYW3Q6IPR3 259 aaKnown RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 DENND1BQ6P3S1 775 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 CYP26C1Q6V0L0 522 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 GALNT7Q86SF2 657 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 MYRIPQ8NFW9 859 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 LINS1Q8NG48 757 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 SPATA20Q8TB22 786 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 AFG1LQ8WV93 481 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 TXNDC15Q96J42 360 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 NOD2Q9HC29 1040 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 DONSONQ9NYP3 566 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 C9orf78Q9NZ63 289 aaPredicted RBP4.24□□□□□ -1.73
UBR3-209ENST00000477461 NARFQ9UHQ1 456 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 CD207Q9UJ71 328 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 DDX19BQ9UMR2 479 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 BCORQ6W2J9 1755 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ADCY9O60503 1353 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 C4AP0C0L4 1744 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 QSER1Q2KHR3 1735 aa4.24□□□□□ -1.73
UBR3-209ENST00000477461 ABCC4O15439 1325 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 RNF123Q5XPI4 1314 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms