RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 METTL5Q9NRN9 209 aaKnown RBP11.39□□□□□ -0.59
BRCA1-213ENST00000476777 TP53TG5Q9Y2B4 290 aa11.39□□□□□ -0.59
BRCA1-213ENST00000476777 ST14Q9Y5Y6 855 aa11.39□□□□□ -0.59
BRCA1-213ENST00000476777 SHANK1Q9Y566 2161 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 IGHV1OR21-1A0A087WYE8 117 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 ENO4A6NNW6 628 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 EFCAB7A8K855 629 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 RASA4BC9J798 803 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 K7EM74 188 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 PDE2AO00408 941 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 BIN1O00499 593 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 RASA4O43374 803 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 LSM8O95777 96 aaKnown RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 CEACAM5P06731 702 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 KRT7P08729 469 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 AK4P27144 223 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 MAP4P27816 1152 aaKnown RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 UQCRFS1P47985 274 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 YBEYP58557 167 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 ILF3Q12906 894 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 CFAP58Q5T655 872 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 AFMIDQ63HM1 303 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 TIPARPQ7Z3E1 657 aaKnown RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 NAGSQ8N159 534 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 GPT2Q8TD30 523 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 RXFP2Q8WXD0 754 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 CPA5Q8WXQ8 436 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 RTP4Q96DX8 246 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 TEFMQ96QE5 360 aaKnown RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 DPYSL5Q9BPU6 564 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 SUDS3Q9H7L9 328 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-213ENST00000476777 PDP2Q9P2J9 529 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 CSMD1Q96PZ7 3565 aa11.38□□□□□ -0.59
BRCA1-213ENST00000476777 C2CD4BA6NLJ0 364 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 TEX33O43247 280 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 ELFN1P0C7U0 828 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 MYCLP1P12525 358 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 NR1D1P20393 614 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 EPHB2P29323 1055 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 SDC4P31431 198 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 HDAC4P56524 1084 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 NOMO3P69849 1222 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 ABHD18Q0P651 414 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 BIRC2Q13490 618 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 SEPT6Q14141 434 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 PARP15Q460N3 678 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 CRTC2Q53ET0 693 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 ATP1A1-AS1Q5TC04 95 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 TMEM71Q6P5X7 295 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 DPPA4Q7L190 304 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 STRADAQ7RTN6 431 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 PHLDB2Q86SQ0 1253 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 PYROXD2Q8N2H3 581 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 MSANTD4Q8NCY6 345 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 STARD8Q92502 1023 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 CENPIQ92674 756 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 NTAN1Q96AB6 310 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 ECHDC3Q96DC8 303 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 CTRCQ99895 268 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 TRNAU1APQ9NX07 287 aaKnown RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 KCNK4Q9NYG8 393 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 UBA2Q9UBT2 640 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 SETD2Q9BYW2 2564 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-213ENST00000476777 FBN2P35556 2912 aa11.37□□□□□ -0.59
BRCA1-213ENST00000476777 WASH4PA8MWX3 477 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 AGFG2O95081 481 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 PTPN9P43378 593 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 GNPDA1P46926 289 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 RGRP47804 291 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 CSNK1DP48730 415 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 CTBSQ01459 385 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 MC2RQ01718 297 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 MC1RQ01726 317 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 RAPGEF1Q13905 1077 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 TCTN3Q6NUS6 607 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 C16orf46Q6P387 395 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 ARHGAP22Q7Z5H3 698 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 NOP9Q86U38 636 aaKnown RBP11.36□□□□□ -0.59
BRCA1-213ENST00000476777 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 JOSD2Q8TAC2 188 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 FAM172AQ8WUF8 416 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 COQ10AQ96MF6 247 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 TEX101Q9BY14 249 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 FRMD8Q9BZ67 464 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-213ENST00000476777 ATP13A3Q9H7F0 1226 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 PHPT1Q9NRX4 125 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-213ENST00000476777 SUFUQ9UMX1 484 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 TMEM184BQ9Y519 407 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms