RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 FAM131BQ86XD5 332 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SNX32Q86XE0 403 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ARHGAP12Q8IWW6 846 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 COLGALT2Q8IYK4 626 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GJD3Q8N144 294 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 LRRC43Q8N309 656 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 FSTL5Q8N475 847 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 NPWQ8N729 165 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 PAPD5Q8NDF8 572 aaKnown RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PPP1R14CQ8TAE6 165 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 FAM81AQ8TBF8 368 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SPPL2BQ8TCT7 592 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 HM13Q8TCT9 377 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SLC2A14Q8TDB8 520 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TMEM40Q8WWA1 233 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 RSPH1Q8WYR4 309 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ZNF669Q96BR6 464 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 PGBD4Q96DM1 585 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 MFSD3Q96ES6 412 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 FAR2Q96K12 515 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TNIP3Q96KP6 325 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 UBXN10Q96LJ8 280 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 BIRC8Q96P09 236 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 AGAP3Q96P47 875 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 RANBP9Q96S59 729 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CDRT15Q96T59 188 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 OSBPL11Q9BXB4 747 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ANKRD60Q9BZ19 345 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 Q9H521 79 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 WDR55Q9H6Y2 383 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 SUDS3Q9H7L9 328 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 CNGB3Q9NQW8 809 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 MAN1C1Q9NR34 630 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 IGSF5Q9NSI5 407 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 FAM49BQ9NUQ9 324 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TMEM161AQ9NX61 479 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SCHIP1Q9P0W5 487 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 FNIP2Q9P278 1114 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ABCD2Q9UBJ2 740 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 STAP1Q9ULZ2 295 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ST3GAL5Q9UNP4 418 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 HES2Q9Y543 173 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 COPG1Q9Y678 874 aaKnown RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 EVPLQ92817 2033 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 VCANP13611 3396 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 E9PBE3 544 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 HCRTO43612 131 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 MGEA5O60502 916 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 KLHL41O60662 606 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 BEST1O76090 585 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PAPSS2O95340 614 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 PEX11BO96011 259 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 F9P00740 461 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 JUNP05412 331 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 FGF4P08620 206 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 LINC00271P0C7V0 271 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CCDC166P0CW27 439 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 IL9P15248 144 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 NCF2P19878 526 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 ATP5F1P24539 256 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 NMBRP28336 390 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 LEPRP48357 1165 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 TAF6P49848 677 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 SULT1E1P49888 294 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 SUOXP51687 545 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ACVR1Q04771 509 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 SOX4Q06945 474 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 CDH17Q12864 832 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 IFRD2Q12894 506 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 SMAD4Q13485 552 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 OLIG2Q13516 323 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PEX6Q13608 980 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 FLOT2Q14254 428 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 COL19A1Q14993 1142 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 UGP2Q16851 508 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 UGT3A2Q3SY77 523 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 KCTD21Q4G0X4 260 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TECRLQ5HYJ1 363 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 COQ5Q5HYK3 327 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TMEM31Q5JXX7 168 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PPM1LQ5SGD2 360 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 C6orf10Q5SRN2 563 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CERCAMQ5T4B2 595 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 INTS11Q5TA45 600 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 KIAA0319Q5VV43 1072 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PDE12Q6L8Q7 609 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 HMBOX1Q6NT76 420 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 DCLRE1AQ6PJP8 1040 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CES3Q6UWW8 571 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 HFE2Q6ZVN8 426 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 LARP4Q71RC2 724 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBR4-212ENST00000475973 PID1Q7Z2X4 250 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms