RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TAS2R13Q9NYV9 303 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 AP3D1O14617 1153 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM63AO94886 807 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CD1EP15812 388 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 FAUP35544 74 aaKnown RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 MNDAP41218 407 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 POLD2P49005 469 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ZBED5Q49AG3 693 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 IL23RQ5VWK5 629 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 SLC15A4Q8N697 577 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM102Q8N9M5 508 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 FBXO32Q969P5 355 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ASB2Q96Q27 587 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CTRCQ99895 268 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TISP43B9A030 160 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 RHOCP08134 193 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 GSTM5P46439 218 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 SMIM11AP58511 58 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TAF1CQ15572 869 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 DEPDC4Q8N2C3 294 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PIWIL2Q8TC59 973 aaKnown RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 AP3S1Q92572 193 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 LPAR1Q92633 364 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 EFHD2Q96C19 240 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CDH19Q9H159 772 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TTYH1Q9H313 450 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CRISPLD1Q9H336 500 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PRSS51A0A1B0GVH4 220 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 VPS4BO75351 444 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ODC1P11926 461 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MAPK10P53779 464 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 FRG1Q14331 258 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 GRB14Q14449 540 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 NFE2Q16621 373 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 CYP2R1Q6VVX0 501 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 EIF3MQ7L2H7 374 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ZHX1-C8orf76Q96EF9 292 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 GLT1D1Q96MS3 346 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 CDRT15Q96T59 188 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 RIT2Q99578 217 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 BHLHE41Q9C0J9 482 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 STAU1O95793 577 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PTPN2P17706 415 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 XRCC1P18887 633 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MYL9P24844 172 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 CAPGP40121 348 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 NPY2RP49146 381 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 HMGCS2P54868 508 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 GDF10P55107 478 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 RUNDC3AQ59EK9 446 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MFSD7Q6UXD7 560 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF248Q8NDW4 579 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PLOD2O00469 737 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 EPN2O95208 641 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 TOP3BO95985 862 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 IFNA6P05013 189 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 BPGMP07738 259 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 DBTP11182 482 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 THOP1P52888 689 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 EFR3AQ14156 821 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MOGQ16653 247 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ALG11Q2TAA5 492 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MARC1Q5VT66 337 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 CADM3Q8N126 398 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ZSWIM2Q8NEG5 633 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 S100ZQ8WXG8 99 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 POU2F3Q9UKI9 436 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 INVSQ9Y283 1065 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ANKRD34BA5PLL1 514 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PLOD3O60568 738 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ENDOD1O94919 500 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MAP3K6O95382 1288 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 VDRP11473 427 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PRKCEQ02156 737 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 FAM182AQ5T1J6 154 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 BROXQ5VW32 411 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms