RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TEX26Q8N6G2 289 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 NIPA2Q8N8Q9 360 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 Q8N9G6 341 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 LSM14AQ8ND56 463 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 WDR36Q8NI36 951 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 FAM71BQ8TC56 605 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 GPBAR1Q8TDU6 330 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SCG3Q8WXD2 468 aaKnown RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TTC9Q92623 222 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SYN2Q92777 582 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 MCCC1Q96RQ3 725 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 NUDCD1Q96RS6 583 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TEX101Q9BY14 249 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 DPH1Q9BZG8 443 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SP110Q9HB58 689 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 CYP4F12Q9HCS2 524 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.03□□□□□ -1.28
HDAC3-207ENST00000475549 EVA1BQ9NVM1 165 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 LRIT1Q9P2V4 623 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 APPL1Q9UKG1 709 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 NENFQ9UMX5 172 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 PLEKHM1Q9Y4G2 1056 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF462Q96JM2 2506 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 TRPM6Q9BX84 2022 aa7.03□□□□□ -1.28
HDAC3-207ENST00000475549 COL27A1Q8IZC6 1860 aaPredicted RBP7.02□□□□□ -1.28
HDAC3-207ENST00000475549 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 A0A1W2PQJ5 194 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SYCE3A1L190 88 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PRSS38A1L453 326 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 H3BRJ5 948 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 K7ENP7 123 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CACNB4O00305 520 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PLD2O14939 933 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PGLSO95336 258 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 MAP3K6O95382 1288 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SERPINC1P01008 464 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PRLP01236 227 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 ITGA2BP08514 1039 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 MYCLP1P12525 358 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 GLB1P16278 677 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CTPS1P17812 591 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 AK4P27144 223 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SLC5A2P31639 672 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 UGT1A5P35504 534 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 MMP13P45452 471 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF135P52742 658 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 TMPRSS3P57727 454 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 TAS2R40P59535 323 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CDK3Q00526 305 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 FANCCQ00597 558 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 VAC14Q08AM6 782 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 C19orf57Q0VDD7 668 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SLC10A2Q12908 348 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PIGHQ14442 188 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 FILIP1LQ4L180 1135 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 KIAA1614Q5VZ46 1190 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 DENND2CQ68D51 928 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 INO80CQ6PI98 192 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 TMCO3Q6UWJ1 677 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 RAB11FIP2Q7L804 512 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SPRED1Q7Z699 444 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 HEATR4Q86WZ0 1026 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 FBXO39Q8N4B4 442 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 ARL14Q8N4G2 192 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 WDR48Q8TAF3 677 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 ARRDC2Q8TBH0 407 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PDCD6IPQ8WUM4 868 aaKnown RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CPLX3Q8WVH0 158 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PATE1Q8WXA2 126 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 GLMNQ92990 594 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SCRN2Q96FV2 425 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 LIN37Q96GY3 246 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 GFM1Q96RP9 751 aaKnown RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 AGAP2Q99490 1192 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 NUP85Q9BW27 656 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 FRMD8Q9BZ67 464 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SEMA6CQ9H3T2 930 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 DPEP2Q9H4A9 486 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 WDR26Q9H7D7 661 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SYNDIG1Q9H7V2 258 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CBX8Q9HC52 389 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 MRPL47Q9HD33 250 aaKnown RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CD84Q9UIB8 345 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 CAPN11Q9UMQ6 739 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 DOLKQ9UPQ8 538 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SLC17A4Q9Y2C5 497 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 TMEM98Q9Y2Y6 226 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PPIL1Q9Y3C6 166 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 PCYT1BQ9Y5K3 369 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-207ENST00000475549 SCINQ9Y6U3 715 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 TENM4Q6N022 2769 aa7.02□□□□□ -1.29
HDAC3-207ENST00000475549 BOD1L1Q8NFC6 3051 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 EIF4E1BA6NMX2 242 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PPM1DO15297 605 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NUDT21O43809 227 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SOCS5O75159 536 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms