RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MCMBPQ9BTE3 642 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 BTBD3Q9Y2F9 522 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 STBD1O95210 358 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CHRNGP07510 517 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CXCR3P49682 368 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 UGT2B15P54855 530 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 ADARP55265 1226 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 NOMO3P69849 1222 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TCEAL5Q5H9L2 206 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 JOSD2Q8TAC2 188 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PTCD3Q96EY7 689 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 HMG20AQ9NP66 347 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CFAP97Q9P2B7 532 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 SUCOQ9UBS9 1254 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 C1RP00736 705 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 FKBP1AP62942 108 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 CBX2Q14781 532 aaPredicted RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 FAM35AQ86V20 835 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 HPS6Q86YV9 775 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 SLC47A1Q96FL8 570 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TLE6Q9H808 572 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TMCO1Q9UM00 188 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CLEC4AQ9UMR7 237 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PPLO60437 1756 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 G3V2T6 193 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SPATA31C1P0DKV0 1188 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ADAMTSL2Q86TH1 951 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 RBFAQ8N0V3 343 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FBXW8Q8N3Y1 598 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 NEK7Q8TDX7 302 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PIGKQ92643 395 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ITCHQ96J02 903 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PLEKHG4BQ96PX9 1271 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CDADC1Q9BWV3 514 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ZNF222Q9UK12 451 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ERGIC3Q9Y282 383 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TCRBV9S1A1TA0A576 114 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SLC15A5A6NIM6 579 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 PEX10O60683 326 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FKTNO75072 461 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ENTPD5O75356 428 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PSMD4P55036 377 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 WNT3AP56704 352 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 MBTD1Q05BQ5 628 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ITGA7Q13683 1181 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 DLG2Q15700 870 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TAB1Q15750 504 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FAM46CQ5VWP2 391 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 GPR180Q86V85 440 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 DAW1Q8N136 415 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 AGO3Q9H9G7 860 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 FBXO5Q9UKT4 447 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ZNF490Q9ULM2 529 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SNX3O60493 162 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 KRT36O76013 467 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 RASGRP1O95267 797 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ADH1CP00326 375 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 HOXB8P17481 243 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 BMP6P22004 513 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ITGA3P26006 1051 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 HSDL1Q3SXM5 330 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SLC25A52Q3SY17 297 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 NET1Q7Z628 596 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 DLG3Q92796 817 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 NMUR1Q9HB89 426 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 GIT1Q9Y2X7 761 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 MYH2Q9UKX2 1941 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TAF4O00268 1085 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TREHO43280 583 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 SSNA1O43805 119 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 OR5F1O95221 314 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 RABGGTBP53611 331 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 KLRC4O43908 158 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PLOD3O60568 738 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 MMP3P08254 477 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PAX7P23759 505 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CORO1AP31146 461 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 PRKCIP41743 596 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PSMD8P48556 350 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CCT3P49368 545 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 CREMQ03060 361 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 ILF2Q12905 390 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 RNASE12Q5GAN4 147 aaKnown RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 PHF13Q86YI8 300 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 TEX47Q8TBZ9 253 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 FEM1CQ96JP0 617 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 COPS8Q99627 209 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TTPALQ9BTX7 342 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 KIAA1522Q9P206 1035 aaPredicted RBP10.97□□□□□ -0.65
VAPB-204ENST00000475243 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 TFPIP10646 304 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 MAPK8P45983 427 aa10.97□□□□□ -0.65
VAPB-204ENST00000475243 CHN2P52757 468 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms