RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 APOOQ9BUR5 198 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 DUSP23Q9BVJ7 150 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 NUP85Q9BW27 656 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 EDEM3Q9BZQ6 932 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 FOXP3Q9BZS1 431 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 THAP2Q9H0W7 228 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 ISCUQ9H1K1 167 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 ATP13A3Q9H7F0 1226 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 SUDS3Q9H7L9 328 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-210ENST00000474684 CPNE5Q9HCH3 593 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 KLQ9UEF7 1012 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 SALL4Q9UJQ4 1053 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 ANAPC7Q9UJX3 599 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 PCDHGC4Q9Y5F7 938 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
CPSF7-210ENST00000474684 TNRC6AQ8NDV7 1962 aaKnown RBP5.94□□□□□ -1.46
CPSF7-210ENST00000474684 B4DGG1 531 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 EIF3CLB5ME19 914 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 H3BRJ5 948 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 NTN3O00634 580 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 DAPK3O43293 454 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 HTRA2O43464 458 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 NOBOXO60393 691 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 MAFKO60675 156 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 RNF8O76064 485 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 RASGRP1O95267 797 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SOD1P00441 154 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CPP00450 1065 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 FUCA1P04066 466 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 RPLP0P05388 317 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PDHA1P08559 390 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ALPIP09923 528 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ELFN1P0C7U0 828 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CCDC172P0C7W6 258 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 GZMAP12544 262 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 KRT10P13645 584 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CTPS1P17812 591 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PCK1P35558 622 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ACTN2P35609 894 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CSNK1DP48730 415 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SCNN1BP51168 640 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ARSEP51690 589 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 MAZP56270 477 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PCBP4P57723 403 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 TAS2R40P59535 323 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SRP54P61011 504 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 AP1S1P61966 158 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 YPEL5P62699 121 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CXADRP78310 365 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 BCL2L1Q07817 233 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SPIDRQ14159 915 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ZNF235Q14590 738 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 AGERQ15109 404 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ATP13A4Q4VNC1 1196 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 FIGNQ5HY92 759 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 DENND2CQ68D51 928 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 NCBP2-AS2Q69YL0 99 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ERAP2Q6P179 960 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 MRPL14Q6P1L8 145 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 TMCO3Q6UWJ1 677 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ENPP7Q6UWV6 458 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 RBM44Q6ZP01 1051 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 HSD11B1LQ7Z5J1 315 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 TRIM74Q86UV6 250 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 HEATR4Q86WZ0 1026 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ATPAF2Q8N5M1 289 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ARL10Q8N8L6 244 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PDCD6IPQ8WUM4 868 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PMEPA1Q969W9 287 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 NUS1Q96E22 293 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 DTD2Q96FN9 168 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 TBATAQ96M53 351 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 COQ10AQ96MF6 247 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ZNF641Q96N77 438 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 RBM15Q96T37 977 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 EIF3CQ99613 913 aaKnown RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 MGME1Q9BQP7 344 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 C1QTNF7Q9BXJ2 289 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SEMA4CQ9C0C4 833 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 BRD8Q9H0E9 1235 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 TMEM168Q9H0V1 697 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 POLR1BQ9H9Y6 1135 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 USP29Q9HBJ7 922 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 NOD2Q9HC29 1040 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SEPT3Q9UH03 358 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ATXN7L1Q9ULK2 861 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PADI4Q9UM07 663 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 PCYT1BQ9Y5K3 369 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-210ENST00000474684 SCINQ9Y6U3 715 aa5.93□□□□□ -1.46
CPSF7-210ENST00000474684 ANKRD12Q6UB98 2062 aa5.92□□□□□ -1.46
CPSF7-210ENST00000474684 A0A1W2PQJ5 194 aa5.92□□□□□ -1.46
CPSF7-210ENST00000474684 PRSS38A1L453 326 aa5.92□□□□□ -1.46
CPSF7-210ENST00000474684 SMTNL1A8MU46 457 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms