RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HERPUD2Q9BSE4 406 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 LRRC61Q9BV99 259 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 SLC13A1Q9BZW2 595 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 BRD8Q9H0E9 1235 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 SUDS3Q9H7L9 328 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-210ENST00000474568 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 SPASTQ9UBP0 616 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 KLQ9UEF7 1012 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 MOSPD1Q9UJG1 213 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 PACSIN2Q9UNF0 486 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-210ENST00000474568 NEUROG3Q9Y4Z2 214 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 PCDHA3Q9Y5H8 950 aa16.02■□□□□ 0.16
ITGB1-210ENST00000474568 SPEGQ15772 3267 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 NEMP2A6NFY4 417 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 CACNB4O00305 520 aaPredicted RBP16.01■□□□□ 0.15
ITGB1-210ENST00000474568 TOR1BO14657 336 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 GCATO75600 419 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 DKK1O94907 266 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 FTCDO95954 541 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 C1SP09871 688 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PTPN3P26045 913 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 NR2C2P49116 596 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PEX5P50542 639 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
ITGB1-210ENST00000474568 RAET1GQ6H3X3 334 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PNCKQ6P2M8 343 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
ITGB1-210ENST00000474568 NT5DC3Q86UY8 548 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 SPATA22Q8NHS9 363 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 BTN2A2Q8WVV5 523 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 DTD2Q96FN9 168 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PDXPQ96GD0 296 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 WDR92Q96MX6 357 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 FAM118BQ9BPY3 351 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 LGR4Q9BXB1 951 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 WDR26Q9H7D7 661 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 MRPL40Q9NQ50 206 aaKnown RBP16.01■□□□□ 0.15
ITGB1-210ENST00000474568 NLGN3Q9NZ94 848 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 PPIL1Q9Y3C6 166 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 MSRB2Q9Y3D2 182 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 ANKRD36A6QL64 1941 aa16.01■□□□□ 0.15
ITGB1-210ENST00000474568 TMEM202A6NGA9 273 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 CAPN8A6NHC0 703 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 H7C0C1 242 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 CLDN7O95471 211 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 MT-CYBP00156 380 aaPredicted RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 SLC4A1P02730 911 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 TSHRP16473 764 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 CTNNA2P26232 953 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 ATP5OP48047 213 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 RWDD2BP57060 319 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 SRP54P61011 504 aaKnown RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 PPP2R5EQ16537 467 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 QPCTQ16769 361 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 TEX44Q53QW1 395 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 ESRP1Q6NXG1 681 aaKnown RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 UNQ6494/PRO21346Q6UXR6 183 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 BBS12Q6ZW61 710 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 PEX26Q7Z412 305 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 OR1E3Q8WZA6 343 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 ALG3Q92685 438 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 IMP4Q96G21 291 aaKnown RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 CALR3Q96L12 384 aaKnown RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 APOLD1Q96LR9 279 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 CLPBQ9H078 707 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 SLC25A51Q9H1U9 297 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 GLOD4Q9HC38 313 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 KLHL8Q9P2G9 620 aaPredicted RBP16■□□□□ 0.15
ITGB1-210ENST00000474568 AMFRQ9UKV5 643 aa16■□□□□ 0.15
ITGB1-210ENST00000474568 CCDC66A2RUB6 948 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 PSMD11O00231 422 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 PMPCBO75439 489 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 RASGRP1O95267 797 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 ANXA6P08133 673 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 PIRTP0C851 137 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 CTSEP14091 401 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 HK3P52790 923 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 GSDMDP57764 484 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 KIAA1024LP59773 190 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 PTSQ03393 145 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 WASHC5Q12768 1159 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 DOK6Q6PKX4 331 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 TECPR1Q7Z6L1 1165 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 HEATR4Q86WZ0 1026 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 CBARPQ8N350 705 aaPredicted RBP15.99■□□□□ 0.15
ITGB1-210ENST00000474568 TXLNBQ8N3L3 684 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 OR56A4Q8NGH8 313 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 SCAMP4Q969E2 229 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITGB1-210ENST00000474568 MLPHQ9BV36 600 aaPredicted RBP15.99■□□□□ 0.15
ITGB1-210ENST00000474568 OSBPL8Q9BZF1 889 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 ABCG8Q9H221 673 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 FGF22Q9HCT0 170 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 DOLKQ9UPQ8 538 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 PCDHGA1Q9Y5H4 931 aa15.99■□□□□ 0.15
ITGB1-210ENST00000474568 LY6G6EA0A0G2JKS1 128 aa15.98■□□□□ 0.15
ITGB1-210ENST00000474568 C1orf232A0A0U1RR37 186 aa15.98■□□□□ 0.15
ITGB1-210ENST00000474568 CPED1A4D0V7 1026 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms