RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PPARDQ03181 441 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 RUNX1T1Q06455 604 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 LRRC14Q15048 493 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 NR6A1Q15406 480 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DPY19L1Q2PZI1 675 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM44Q2T9K0 475 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EIPR1Q53HC9 387 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 KLHDC10Q6PID8 442 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PIWIL4Q7Z3Z4 852 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 AMZ2Q86W34 360 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SCML4Q8N228 414 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SDR16C5Q8N3Y7 309 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DPP10Q8N608 796 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF513Q8N8E2 541 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 OR52L1Q8NGH7 329 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SETD7Q8WTS6 366 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 MRPL38Q96DV4 380 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CPNE2Q96FN4 548 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EXOC2Q96KP1 924 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TEPSINQ96N21 525 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TEFMQ96QE5 360 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 S100A13Q99584 98 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 MRPL57Q9BQC6 102 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CFHR5Q9BXR6 569 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 FUT8Q9BYC5 575 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 MUC13Q9H3R2 512 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 MVB12BQ9H7P6 319 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 USP29Q9HBJ7 922 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ANKHQ9HCJ1 492 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 GJB4Q9NTQ9 266 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TRPC4Q9UBN4 977 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 VPS4AQ9UN37 437 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ADAMTS5Q9UNA0 930 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 N4BP2Q86UW6 1770 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DUXAA6NLW8 204 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 WASHC1A8K0Z3 465 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 UPK3BL1B0FP48 263 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 WASH3PC4AMC7 463 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TRIM49D1C9J1S8 452 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 UPK3BL2E5RIL1 263 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 H3BNC9 293 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PSMD11O00231 422 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CCNE2O96020 404 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 C4BPAP04003 597 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA31C1P0DKV0 1188 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ERCC2P18074 760 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PIK3R1P27986 724 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CXCR5P32302 372 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SLC11A1P49279 550 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CASP4P49662 377 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CLCNKBP51801 687 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 KRR1Q13601 381 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CUL3Q13618 768 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 C1DQ13901 141 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SMTNL2Q2TAL5 461 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SEZ6Q53EL9 994 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CAPRIN2Q6IMN6 1127 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 WASH2PQ6VEQ5 465 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 C11orf96Q7Z7L8 435 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SYT12Q8IV01 421 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SCUBE3Q8IX30 993 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DNAJC19Q96DA6 116 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SCLYQ96I15 445 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EFCAB11Q9BUY7 163 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SUV39H2Q9H5I1 410 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PAPOLBQ9NRJ5 636 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 WBP11Q9Y2W2 641 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PCDHGB5Q9Y5G0 923 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 AFDNP55196 1824 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 BCLAF3A2AJT9 711 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TP53I11O14683 189 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PPEF2O14830 753 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 NOL4O94818 638 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SNAI1O95863 264 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ECDO95905 644 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 IFNGP01579 166 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ALDOAP04075 364 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 FGFR3P22607 806 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 AMPD1P23109 780 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PTX3P26022 381 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CD86P42081 329 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PKNOX1P55347 436 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SELENOVP59797 346 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DSG1Q02413 1049 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 FLOT2Q14254 428 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 NCF4Q15080 339 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TAF13Q15543 124 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TEX44Q53QW1 395 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CDC73Q6P1J9 531 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TMC5Q6UXY8 1006 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SLC47A2Q86VL8 602 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PLXDC1Q8IUK5 500 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ARHGEF19Q8IW93 802 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ADGRG2Q8IZP9 1017 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF527Q8NB42 609 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SETD9Q8NE22 299 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA20Q8TB22 786 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 METTL6Q8TCB7 284 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EPS8L1Q8TE68 723 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms